• eQTLs as causal instruments for the reconstruction of hormone linked gene networks 

      Bankier, Sean Alexander; Michoel, Tom (Journal article; Peer reviewed, 2022)
      Hormones act within in highly dynamic systems and much of the phenotypic response to variation in hormone levels is mediated by changes in gene expression. The increase in the number and power of large genetic association ...
    • Error Detection and Correction for Symmetric and Asymmetric Channels 

      Naydenova, Irina Petkova (Doctoral thesis, 2007-08-27)
      When a message is sent over a channel errors can occur due to noise during the transmission. So it is very important to know the error correction and detection capability of the code, which is used to encode the message. ...
    • ETH Tight Algorithms for Geometric Intersection Graphs: Now in Polynomial Space 

      Fomin, Fedor; Golovach, Petr; Inamdar, Tanmay Nitin; Saurabh, Saket (Journal article; Peer reviewed, 2021)
      De Berg et al. in [SICOMP 2020] gave an algorithmic framework for subexponential algorithms on geometric graphs with tight (up to ETH) running times. This framework is based on dynamic programming on graphs of weighted ...
    • ETH-Tight Algorithms for Finding Surfaces in Simplicial Complexes of Bounded Treewidth 

      Black, Mitchell; Blaser, Nello; Nayyeri, Amir; Vågset, Erlend Raa (Journal article; Peer reviewed, 2022)
      Given a simplicial complex with n simplices, we consider the Connected Subsurface Recognition (c-SR) problem of finding a subcomplex that is homeomorphic to a given connected surface with a fixed boundary. We also study ...
    • ETH-tight algorithms for long path and cycle on unit disk graphs 

      Fomin, Fedor; Lokshtanov, Daniel; Panolan, Fahad; Saurabh, Saket; Zehavi, Meirav (Journal article; Peer reviewed, 2020)
      We present an algorithm for the extensively studied Long Path and Long Cycle problems on unit disk graphs that runs in time 2O(√k)(n + m). Under the Exponential Time Hypothesis, Long Path and Long Cycle on unit disk graphs ...
    • Evolution and developmental system drift in the endoderm gene regulatory network of Caenorhabditis and other nematodes 

      Ewe, Chee Kiang; Torres Cleuren, Yamila Nicole; Rothman, Joel H (Journal article; Peer reviewed, 2020)
      Developmental gene regulatory networks (GRNs) underpin metazoan embryogenesis and have undergone substantial modification to generate the tremendous variety of animal forms present on Earth today. The nematode Caenorhabditis ...
    • Exact algorithms for MAX-2SAT and MAX-3SAT via multidimensional matrix multiplication 

      Petkevich, Yevgheni (Master thesis, 2015-06-01)
      In this thesis it is showed how an \(O(n^{4-\epsilon})\) algorithm for the cube multiplication problem (that is defined in the thesis) would imply a faster than naive \(O^{*}(2^{n(1-\frac{\epsilon}{4})})\) algorithm for ...
    • Exact algorithms for treewidth and minimum fill-in 

      Fomin, Fedor; Todinca, Ioan; Kratsch, Dieter; Villanger, Yngve (Journal article, 2006)
    • Exact and approximate digraph bandwidth 

      Jain, Pallavi; Kanesh, Lawqueen; Lochet, William; Saurabh, Saket; Sharma, Roohani (Journal article; Peer reviewed, 2019)
      In this paper, we introduce a directed variant of the classical Bandwidth problem and study it from the view-point of moderately exponential time algorithms, both exactly and approximately. Motivated by the definitions of ...
    • Exact Exponential Algorithms for Clustering Problems 

      Fomin, Fedor; Golovach, Petr; Inamdar, Tanmay Nitin; Purohit, Nidhi; Saurabh, Saket (Journal article; Peer reviewed, 2022)
      In this paper we initiate a systematic study of exact algorithms for some of the well known clustering problems, namely k-MEDIAN and k-MEANS. In k-MEDIAN, the input consists of a set X of n points belonging to a metric ...
    • Exact methods for solving the small scale single vehicle pickup and delivery problem with time windows 

      Lakel, Yacine Mohamed (Master thesis, 2016-08-15)
      The single vehicle pickup and delivery problem with time windows (1-PDPTW) is a wellknown problem in transportation and combinatorics. In practice, these routes are relatively small with less then 30 stops. In this thesis, ...
    • Experimental Study on One-Time Password used in Authentication within Norwegian Banking 

      Naguleswaran, Sivanja (Master thesis, 2020-06-26)
      Authentication is a vital part of this fast-growing, digitalized world. Fundamentally, today’s society is more reliant on computer technology and digitalization than ever before. Therefore, the use of dynamic one-time ...
    • Exploiting graph structures for computational efficiency 

      Strømme, Torstein Jarl Fagerbakke (Doctoral thesis, 2020-05-07)
      Coping with NP-hard graph problems by doing better than simply brute force is a field of significant practical importance, and which have also sparked wide theoretical interest. One route to cope with such hard graph ...
    • Exploring graph parameters similar to tree-width and path-width 

      Nordstrand, Joakim Alme (Master thesis, 2017-07-04)
      In a recent paper appearing at IPEC 2015, ”Maximum matching width: new characterization and fast algorithms for dominating set” [12], three similar treelike parameters, tree-width, branch-width and maximum matching-width, ...
    • Exploring Microservice Security 

      Yarygina, Tetiana (Doctoral thesis, 2018-10-10)
      Due to rapid transitioning towards digitalized society and extended reliance on interconnected digital systems, computer security is a field of growing importance. Software that we build should be secure, resilient and ...
    • Exploring MultiPath TCP Through Discrete Event Simulation 

      Hexeberg, Henrik Libeck (Master thesis, 2021-06-01)
      Global internet usage is rapidly becoming more mobile. Devices are, as a consequence, equipped with multiple network interfaces to meet the demand for mobility. With the emergence of 5G-technology, this trend will most ...
    • Exploring Subexponential Parameterized Complexity of Completion Problems 

      Drange, Pål Grønås; Fomin, Fedor; Pilipczuk, Michal Pawel; Villanger, Yngve (Peer reviewed; Journal article, 2014-02-19)
      Let F be a family of graphs. In the F-Completion problem, we are given an n-vertex graph G and an integer k as input, and asked whether at most k edges can be added to G so that the resulting graph does not contain a graph ...
    • Exploring the evolution of protein function in Archaea 

      Goncearenco, Alexander; Berezovsky, Igor N. (Peer reviewed; Journal article, 2012-05-30)
      Background: Despite recent progress in studies of the evolution of protein function, the questions what were the first functional protein domains and what were their basic building blocks remain unresolved. Previously, we ...
    • Exponential time algorithms: Structures, measures, and bounds 

      Gaspers, Serge (Doctoral thesis, 2008-12-05)
      This thesis studies exponential time algorithms, more precisely, algorithms exactly solving problems for which no polynomial time algorithm is known and likely to exist. Interested in worst–case upper bounds on the running ...
    • Expressive Visualization and Rapid Interpretation of Seismic Volumes 

      Patel, Daniel (Doctoral thesis, 2009-10-27)
      One of the most important resources in the world today is energy. Oil and gas provide two thirds of the world energy consumption, making the world completely dependent on it. Locating and recovering the remaining oil and ...