Browsing Department of Informatics by Title
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Exploring Subexponential Parameterized Complexity of Completion Problems
(Schloss Dagstuhl  LeibnizZentrum fuer Informatik, 20140219)Let F be a family of graphs. In the FCompletion problem, we are given an nvertex graph G and an integer k as input, and asked whether at most k edges can be added to G so that the resulting graph does not contain a ...Journal article 
Exploring the evolution of protein function in Archaea
(BioMed Central, 20120530)Background: Despite recent progress in studies of the evolution of protein function, the questions what were the first functional protein domains and what were their basic building blocks remain unresolved. Previously, we ...Journal article 
Exponential time algorithms: Structures, measures, and bounds
(The University of Bergen, 20081205)This thesis studies exponential time algorithms, more precisely, algorithms exactly solving problems for which no polynomial time algorithm is known and likely to exist. Interested in worst–case upper bounds on the running ...Doctoral thesis 
Expressive Visualization and Rapid Interpretation of Seismic Volumes
(The University of Bergen, 20091027)One of the most important resources in the world today is energy. Oil and gas provide two thirds of the world energy consumption, making the world completely dependent on it. Locating and recovering the remaining oil and ...Doctoral thesis 
Fast biclustering by dual parameterization
(Dagstuhl Publishing, 2015)We study two clustering problems, Starforest Editing, the problem of adding and deleting edges to obtain a disjoint union of stars, and the generalization Bicluster Editing. We show that, in addition to being NPhard, none ...Conference object 
Fast Method for MaximumFlow Problem with MinimumLot Sizes
(The University of Bergen, 20150303)In transportation networks, such as pipeline networks for transporting natural gas, it is often impractical to send across amounts of flow below a certain threshold. Such lower threshold is referred as the minimumlot size. ...Master thesis 
Fast methods to solve the pooling problem
(The University of Bergen, 20140531)In pipeline transportation of natural gas, simple network flow problems are replaced by hard ones when bounds on the flow quality are imposed. The sources, typically represented by gas wells, provide flow of unequal ...Master thesis 
Feasible Algorithms for Semantics — Employing Automata and Inference Systems
(The University of Bergen, 20101216)Doctoral thesis 
Filtering duplicate reads from 454 pyrosequencing data
(Oxford University Press, 2013)Motivation: Throughout the recent years, 454 pyrosequencing has emerged as an efficient alternative to traditional Sanger sequencing and is widely used in both de novo wholegenome sequencing and metagenomics. Especially ...Peer reviewedJournal article 
Filtering of FTLE for Visualizing Spatial Separation in Unsteady 3D Flow
(Springer, 2012)In many cases, feature detection for flow visualization is structured in two phases: first candidate identification, and then filtering. With this paper, we propose to use the directional information contained in the ...Peer reviewedJournal article 
Finding even subgraphs even faster
(Dagstuhl Publishing, 2015)Problems of the following kind have been the focus of much recent research in the realm of parameterized complexity: Given an input graph (digraph) on n vertices and a positive integer parameter k, find if there exist k ...Conference object 
Finding Induced Subgraphs via Minimal Triangulations
(Dagstuhl Publishing, 2010)Potential maximal cliques and minimal separators are combinatorial objects which were introduced and studied in the realm of minimal triangulation problems in cluding Minimum Fillin and Treewidth. We discover unexpected ...Conference object 

Finding Resource Bounds in the Presence of Explicit Deallocation
(Springer Berlin Heidelberg, 20051017)A software program requesting a resource that is not available usually raises an outofresource exception. Component software is software that has been assembled from standardized, reusable components which, in turn, may ...Journal article 
Floating Fault Analysis of Trivium
(Springer Berlin Heidelberg, 2008)One of the eSTREAM final portfolio ciphers is the hardwareoriented stream cipher Trivium. It is based on 3 nonlinear feedback shift registers with a linear output function. Although Trivium has attached a lot of interest, ...ChapterPeer reviewed 
Formulas as programs
(2003)Alma0 is a programming language supporting declarative programming, which combines the advantages of imperative and logic programming paradigms. This work explores declarative programming by extending the interpretation ...Master thesis 
FreeContact: fast and free software for protein contact prediction from residue coevolution
(BioMed Central, 20140326)Background: 20 years of improved technology and growing sequences now renders residueresidue contact constraints in large protein families through correlated mutations accurate enough to drive de novo predictions of protein ...Journal article 
FreeContact: Fast and free software for protein contact prediction from residue coevolution
(BioMed Central, 20140326)Background: 20 years of improved technology and growing sequences now renders residueresidue contact constraints in large protein families through correlated mutations accurate enough to drive de novo predictions of protein ...Journal article