Now showing items 283-302 of 398

    • QALM - a tool for automating quantitative analysis of LC-MS-MS/MS data 

      Lerøy, Kjartan (The University of Bergen, 2010-05-31)
      The goal of bioinformatics is to support science and research in the field of biology through the application of information technology. Proteomics is a field within biology that deals with the study of proteins. This paper ...
      Master thesis
    • Quantum social networks 

      Cabello, Adán; Danielsen, Lars Eirik; López-Tarrida, Antonio J.; Portillo, José R. (Institute of Physics, 2012-06-27)
      We introduce a physical approach to social networks (SNs) in which each actor is characterized by a yes–no test on a physical system. This allows us to consider SNs beyond those originated by interactions based on pre-existing ...
      Peer reviewedJournal article
    • Quick but odd growth of cacti 

      Kolay, Sudeshna; Lokshtanov, Daniel; Panolan, Fahad; Saurabh, Saket (Dagstuhl Publishing, 2015)
      Let F be a family of graphs. Given an input graph G and a positive integer k, testing whether G has a k-sized subset of vertices S, such that G\S belongs to F, is a prototype vertex deletion problem. These type of problems ...
      Conference object
    • Randomised Construction and Dynamic Decoding of LDPC Codes 

      Knudsen, Joakim Grahl (The University of Bergen, 2005-11-30)
      Master thesis
    • Rate and power allocation for discrete-rate link adaptation 

      Gjendemsjø, Anders; Øien, Geir Egil; Holm, Henrik; Alouini, Mohamed-Slim; Gesbert, David; Hole, Kjell Jørgen; Orten, Pål (Springer, 2008-01-09)
      Link adaptation, in particular adaptive coded modulation (ACM), is a promising tool for bandwidth-efficient transmission in a fading environment. The main motivation behind employing ACM schemes is to improve the spectral ...
      Journal article
    • Recursive Time-Frequency Reassignment 

      Nilsen, Geir Kjetil (The University of Bergen, 2008-11-18)
      A fast algorithm for producing time-frequency representations (TFRs) is proposed. The resulting TFRs have optional time-frequency resolution up to optimality. The algorithm is further extended with a method known as ...
      Master thesis
    • Reflections on Courses for Software Language Engineering 

      Bagge, Anya Helene; Lämmel, Ralf; Zaytsev, Vadim (2014)
      Software Language Engineering (SLE) has emerged as a field in computer science research and software engineering, but it has yet to become entrenched as part of the standard curriculum at universities. Many places have a ...
      Conference object
    • Regular Expressions with Numerical Constraints and Automata with Counters 

      Hovland, Dag (Springer, 2009)
      Regular expressions with numerical constraints are an extension of regular expressions, allowing to bound numerically the number of times that a subexpression should be matched. Expressions in this extension describe the ...
      ChapterPeer reviewed
    • Regulatory mechanisms of non-coding RNAs during zebrafish embryogenesis 

      Nepal, Chirag (The University of Bergen, 2013-05-03)
      For many years, RNAs were thought to be intermediate products between DNA and protein. The discovery of RNA interference (RNAi), a regulatory process that uses small non-coding RNAs to regulate gene expression at the ...
      Doctoral thesis
    • Reliable Asynchronous Communication in Distributed Systems 

      Johnsen, Espen (The University of Bergen, 2018-04-11)
      Master thesis
    • Repeats and EST analysis for new organisms 

      Malde, Ketil; Jonassen, Inge (BioMed Central, 2008-01-18)
      Background Repeat masking is an important step in the EST analysis pipeline. For new species, genomic knowledge is scarce and good repeat libraries are typically unavailable. In these cases it is common practice to mask ...
      Journal article
    • Ridge Extraction, and Illustrative Visualization of an FTLE Flow Field. 

      Sivertsen, Stian (The University of Bergen, 2012-06-01)
      Illustrative visualization of a flow is an area that is proving to be interesting and in later years something that have been somewhat explored, it can provide some very interesting results and in this thesis we find ...
      Master thesis
    • Risks in Networked Computer Systems 

      Klingsheim, André N. (The University of Bergen, 2008-09-24)
      Networked computer systems yield great value to businesses and governments, but also create risks. The eight papers in this thesis highlight vulnerabilities in computer systems that lead to security and privacy risks. A ...
      Doctoral thesis
    • Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis 

      Möller, Steffen; Prescott, Stuart W.; Wirzenius, Lars; Reinholdtsen, Petter; Chapman, Brad; Prins, Pjotr; Soiland-Reyes, Stian; Klötzl, Fabian; Bagnacani, Andrea; Kalaš, Matúš; Tille, Andreas; Crusoe, Michael R. (Springer, 2017-09)
      Information integration and workflow technologies for data analysis have always been major fields of investigation in bioinformatics. A range of popular workflow suites are available to support analyses in computational ...
      Journal article
    • The Role of Humans in Complex ICT Systems 

      Kazymyrova, Valentyna (The University of Bergen, 2016-10-16)
      In the modern world, companies, regardless of their type of business, rely on information and communications technology (ICT) systems to carry out their everyday operations. The ICT systems have been developed over time ...
      Master thesis
    • Rotasjonsinvariante turbokoder 

      Knudtsen, Christian Skauge (The University of Bergen, 2003)
      Master thesis
    • Salmon louse (Lepeophtheirus salmonis) transcriptomes during post molting maturation and egg production, revealed using EST-sequencing and microarray analysis 

      Eichner, Christiane; Frost, Petter; Dysvik, Bjarte; Jonassen, Inge; Kristiansen, Bjørn; Nilsen, Frank (BioMed Central, 2008-03-10)
      Background Lepeophtheirus salmonis is an ectoparasitic copepod feeding on skin, mucus and blood from salmonid hosts. Initial analysis of EST sequences from pre adult and adult stages of L. salmonis revealed a large ...
      Peer reviewedJournal article
    • SBMLmod: a Python-based web application and web service for efficient data integration and model simulation 

      Schäuble, Sascha; Stavrum, Anne-Kristin; Bockwoldt, Mathias; Puntervoll, Pål; Heiland, Ines (BioMed Central, 2017-06-24)
      Background: Systems Biology Markup Language (SBML) is the standard model representation and description language in systems biology. Enriching and analysing systems biology models by integrating the multitude of available ...
      Journal article
    • Scaling the scales - A suggested improvement to IBM's Intelligent Recommendation Algorithm 

      Myrtveit, Magnar (The University of Bergen, 2014-11-20)
      Recommender systems appear in a large variety of applications, and their use has become very common in recent years. As a lot of money can be made by companies having a better recommender system than their competitors, ...
      Master thesis
    • The Second Rewrite Engines Competition 

      Durán, Francisco; Roldán, Manuel; Balland, Emilie; van den Brand, Mark; Eker, Steven; Kalleberg, Karl Trygve; Kats, Lennart C. L.; Moreau, Pierre-Etienne; Schevchenko, Ruslan; Visser, Eelco (Elsevier, 2009-06-29)
      The Second Rewrite Engines Competition (REC) was celebrated as part of the 7th Workshop on Rewriting Logic and its Applications (WRLA 2008). In this edition of the competition participated five systems, namely ASF+SDF, ...
      Journal article