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dc.contributor.authorHowell, Kerry L.
dc.contributor.authorDavies, Jaime S.
dc.contributor.authorAllcock, Louise
dc.contributor.authorBraga-Henriques, Andreia
dc.contributor.authorBuhl-Mortensen, Pål
dc.contributor.authorCarreiro-Silva, Marina
dc.contributor.authorDominguez-Carrio, Carlos
dc.contributor.authorDurden, Jennifer M.
dc.contributor.authorFoster, Nicola L.
dc.contributor.authorGame, Chloe A.
dc.contributor.authorHitchin, Becky
dc.contributor.authorHorton, Tammy
dc.contributor.authorHosking, Brett
dc.contributor.authorJones, Daniel O.B.
dc.contributor.authorMah, Christopher L.
dc.contributor.authorLaguionie Marchais, Claire
dc.contributor.authorMenot, Lenaick
dc.contributor.authorMorato, Telmo
dc.contributor.authorPearman, Tabitha R.R.
dc.contributor.authorRoss, Rebecca
dc.contributor.authorRuhl, Henry A.
dc.contributor.authorSaeedi, Hanieh
dc.contributor.authorStefanoudis, Paris V.
dc.contributor.authorTaranto, Gerald H.
dc.contributor.authorThompson, Michael B.
dc.contributor.authorTaylor, James R.
dc.contributor.authorTyler, Paul A.
dc.contributor.authorVad, Johanne
dc.contributor.authorVictorero, Lissette
dc.contributor.authorVieira, Rui P.
dc.contributor.authorWoodall, Lucy C.
dc.contributor.authorXavier, Joana R.
dc.contributor.authorWagner, Daniel
dc.date.accessioned2020-04-11T10:18:34Z
dc.date.available2020-04-11T10:18:34Z
dc.date.issued2019-12-31
dc.PublishedHowell KL, Davies, Allcock L, Braga-Henriques, Buhl-Mortensen P, Carreiro-Silva M, Dominguez-Carrio, Durden JM, Foster, Game, Hitchin, Horton T, Hosking, Jones DO, Mah CL, Laguionie Marchais, Menot L, Morato T, Pearman, Ross E, Ruhl HA, Saeedi, Stefanoudis, Taranto, Thompson, Taylor, Tyler PA, Vad, Victorero, Vieira RP, Woodall, Xavier JR, Wagner. A framework for the development of a global standardised marine taxon reference image database (SMarTaR-ID) to support image-based analyses. PLOS ONE. 2019;14(12)eng
dc.identifier.issn1932-6203en_US
dc.identifier.urihttp://hdl.handle.net/1956/21837
dc.description.abstractVideo and image data are regularly used in the field of benthic ecology to document biodiversity. However, their use is subject to a number of challenges, principally the identification of taxa within the images without associated physical specimens. The challenge of applying traditional taxonomic keys to the identification of fauna from images has led to the development of personal, group, or institution level reference image catalogues of operational taxonomic units (OTUs) or morphospecies. Lack of standardisation among these reference catalogues has led to problems with observer bias and the inability to combine datasets across studies. In addition, lack of a common reference standard is stifling efforts in the application of artificial intelligence to taxon identification. Using the North Atlantic deep sea as a case study, we propose a database structure to facilitate standardisation of morphospecies image catalogues between research groups and support future use in multiple front-end applications. We also propose a framework for coordination of international efforts to develop reference guides for the identification of marine species from images. The proposed structure maps to the Darwin Core standard to allow integration with existing databases. We suggest a management framework where high-level taxonomic groups are curated by a regional team, consisting of both end users and taxonomic experts. We identify a mechanism by which overall quality of data within a common reference guide could be raised over the next decade. Finally, we discuss the role of a common reference standard in advancing marine ecology and supporting sustainable use of this ecosystem.en_US
dc.language.isoengeng
dc.publisherPLoSen_US
dc.rightsAttribution CC0 1.0eng
dc.rights.urihttps://creativecommons.org/publicdomain/zero/1.0/eng
dc.titleA framework for the development of a global standardised marine taxon reference image database (SMarTaR-ID) to support image-based analysesen_US
dc.typePeer reviewed
dc.typeJournal article
dc.date.updated2020-01-10T15:05:39Z
dc.description.versionpublishedVersionen_US
dc.identifier.doihttps://doi.org/10.1371/journal.pone.0218904
dc.identifier.cristin1769164
dc.source.journalPLOS ONE


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