miRDeep2
|
![]() |
miRDeep2 scorefor details on how the log-odds score is calculated, see Friedlander et al., Nature Biotechnology, 2008. | estimated signal-to-noisefor the given score cut-off, the signal-to-noise ratio is estimated as r = total miRNA hairpins reported / mean estimated false positive miRNA hairpins over 100 rounds of permuted controls. | excision gearingthis is the minimum read stack height required for excising a potential miRNA precursor from the genome in this analysis. |
---|---|---|
10 | 0.7 | 5 |
9 | 0.7 | 5 |
8 | 0.7 | 5 |
7 | 0.6 | 5 |
6 | 0.6 | 5 |
5 | 1.1 | 5 |
4 | 1.6 | 5 |
3 | 1.2 | 5 |
2 | 0.9 | 5 |
1 | 0.8 | 5 |
0 | 0.7 | 5 |
-1 | 0.6 | 5 |
-2 | 0.5 | 5 |
-3 | 0.5 | 5 |
-4 | 0.6 | 5 |
-5 | 0.7 | 5 |
-6 | 0.7 | 5 |
-7 | 0.7 | 5 |
-8 | 0.8 | 5 |
-9 | 0.8 | 5 |
-10 | 0.8 | 5 |