Blar i Bergen Open Research Archive på forfatter "Prianichnikov, Nikita"

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    • MaxDIA enables library-based and library-free data-independent acquisition proteomics 

      Sinitcyn, Pavel; Hamzeiy, Hamid; Salinas Soto, Favio; Itzhak, Daniel; McCarthy, Frank; Wichmann, Christoph; Steger, Martin; Ohmayer, Uli; Distler, Ute; Kaspar-Schoenefeld, Stephanie; Prianichnikov, Nikita; Yılmaz, Şule; Rudolph, Jan Daniel; Tenzer, Stefan; Perez-Riverol, Yasset; Nagaraj, Nagarjuna; Humphrey, Sean J.; Cox, Juergen (Journal article; Peer reviewed, 2021)
      MaxDIA is a software platform for analyzing data-independent acquisition (DIA) proteomics data within the MaxQuant software environment. Using spectral libraries, MaxDIA achieves deep proteome coverage with substantially ...

    • Maxquant software for ion mobility enhanced shotgun proteomics 

      Prianichnikov, Nikita; Koch, Heiner; Koch, Scarlet; Lubeck, Markus; Heilig, Raphael; Brehmer, Sven; Fischer, Roman; Cox, Heinz Jürgen (Journal article; Peer reviewed, 2020)
      Ion mobility can add a dimension to LC-MS based shotgun proteomics which has the potential to boost proteome coverage, quantification accuracy and dynamic range. Required for this is suitable software that extracts the ...