Browsing Bergen Open Research Archive by Author "Bockwoldt, Mathias"
Now showing items 1-3 of 3
-
Early Evolutionary Selection of NAD Biosynthesis Pathway in Bacteria
Sharma, Suraj; Hsieh, Yin-Chen; Dietze, Jørn; Bockwoldt, Mathias; Strømland, Øyvind; Ziegler, Mathias; Heiland, Ines (Journal article; Peer reviewed, 2022)Bacteria use two alternative pathways to synthesize nicotinamide adenine dinucleotide (NAD) from nicotinamide (Nam). A short, two-step route proceeds through nicotinamide mononucleotide (NMN) formation, whereas the other ... -
Mind the gap – Relevant design for laboratory oil exposure of fish as informed by a numerical impact assessment model
Frøysa, Håvard Guldbrandsen; Nepstad, Raymond; Meier, Sonnich; Donald, Carey; Sørhus, Elin; Bockwoldt, Mathias; Carroll, JoLynn; Vikebø, Frode Bendiksen (Journal article; Peer reviewed, 2023)Laboratory experiments provide knowledge of species-specific effects thresholds that are used to parameterize impact assessment models of oil contamination on marine ecosystems. Such experiments typically place individuals ... -
SBMLmod: a Python-based web application and web service for efficient data integration and model simulation
Schäuble, Sascha; Stavrum, Anne-Kristin; Bockwoldt, Mathias; Puntervoll, Pål; Heiland, Ines (Peer reviewed; Journal article, 2017-06-24)Background: Systems Biology Markup Language (SBML) is the standard model representation and description language in systems biology. Enriching and analysing systems biology models by integrating the multitude of available ...