Browsing Bergen Open Research Archive by Author "Rubin, Carl-Johan"

Now showing items 1-4 of 4

    • Comparison of anadromous and landlocked Atlantic salmon genomes reveals signatures of parallel and relaxed selection across the Northern Hemisphere 

      Kjærner-Semb, Erik Nordtorp; Edvardsen, Rolf Brudvik; Ayllon, Fernando; Vogelsang, Petra; Furmanek, Tomasz; Rubin, Carl-Johan; Veselov, Alexey E.; Nilsen, Tom Ole; McCormick, Stephen D.; Primmer, Craig R.; Wargelius, Anna (Journal article; Peer reviewed, 2020)
      Most Atlantic salmon (Salmo salar L.) populations follow an anadromous life cycle, spending early life in freshwater, migrating to the sea for feeding, and returning to rivers to spawn. At the end of the last ice age ~10,000 ...

    • The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing 

      Barrio, Alvaro Martinez; Lamichhaney, Sangeet; Fan, Guangyi; Rafati, Nima; Pettersson, Mats; Zhang, He; Dainat, Jacques; Ekman, Diana; Höppner, Marc P.; Jern, Patric; Martin, Marcel; Nystedt, Björn; Liu, Xin; Chen, Wenbin; Liang, Xinming; Shi, Chengcheng; Fu, Yuanyuan; Ma, Kailong; Zhan, Xiao; Feng, Chungang; Gustafson, Ulla; Rubin, Carl-Johan; Almén, Markus Sällman; Blass, Martina; Casini, Michele; Folkvord, Arild; Laikre, Linda; Ryman, Nils; Lee, Simon Ming-Yuen; Xu, Xun; Andersson, Leif (Peer reviewed; Journal article, 2016-05-03)
      Ecological adaptation is of major relevance to speciation and sustainable population management, but the underlying genetic factors are typically hard to study in natural populations due to genetic differentiation caused ...

    • Moderate nucleotide diversity in the Atlantic herring is associated with a low mutation rate 

      Feng, Chungang; Pettersson, Mats; Lamichhaney, Sangeet; Rubin, Carl-Johan; Rafati, Nima; Casini, Michele; Folkvord, Arild; Andersson, Leif (Peer reviewed; Journal article, 2017-06-30)
      The Atlantic herring is one of the most abundant vertebrates on earth but its nucleotide diversity is moderate (π = 0.3%), only three-fold higher than in human. Here, we present a pedigree-based estimation of the mutation ...

    • Reconstruction of the birth of a male sex chromosome present in Atlantic herring 

      Rafati, Nima; Chen, Junfeng; Herpin, Amaury; Pettersson, Mats; Han, Fan; Feng, Chungang; Wallerman, Ola; Rubin, Carl-Johan; Péron, Sandrine; Cocco, Arianna; Larsson, Mårten; Trötschel, Christian; Poetsch, Ansgar; Korsching, Kai; Bönigk, Wolfgang; Körschen, Heinz G.; Berg, Florian; Folkvord, Arild; Benjamin Kaupp, Kaupp; Schartl, Manfred; Andersson, Leif (Journal article; Peer reviewed, 2020)
      The mechanisms underlying sex determination are astonishingly plastic. Particularly the triggers for the molecular machinery, which recalls either the male or female developmental program, are highly variable and have ...