• Community-driven development for computational biology at Sprints, Hackathons and Codefests 

      Möller, Steffen; Afgan, Enis; Banck, Michael; Bonnal, Raoul J. P.; Booth, Timothy; Chilton, John; Cock, Peter J. A.; Gumbel, Markus; Harris, Nomi; Holland, Richard; Kalaš, Matúš; Kaján, László; Kibukawa, Eri; Powel, David R.; Prins, Pjotr; Quinn, Jacqueline; Sallou, Olivier; Strozzi, Francesco; Seemann, Torsten; Sloggett, Clare; Soiland-Reyes, Stian; Spooner, William; Steinbiss, Sascha; Tille, Andreas; Travis, Anthony J.; Guimera, Roman V.; Katayama, Toshiaki; Chapman, Brad A. (Peer reviewed; Journal article, 2014-11-27)
      Background: Computational biology comprises a wide range of technologies and approaches. Multiple technologies can be combined to create more powerful workflows if the individuals contributing the data or providing tools ...
    • Perspectives on automated composition of workflows in the life sciences [version 1; peer review: 2 approved] 

      Lamprecht, Anna-Lena; Palmblad, Magnus; Ison, Jon; Schwämmle, Veit; Al Manir, Mohammad Sadnan; Altintas, Ilkay; Baker, Christopher J. O.; Ben Hadj Amor, Ammar; Capella-Gutierrez, Salvador; Charonyktakis, Paulos; Crusoe, Michael R.; Gil, Yolanda; Goble, Carole; Griffin, Timothy J.; Groth, Paul; Ienasescu, Hans; Jagtap, Pratik; Kalaš, Matúš; Kasalica, Vedran; Khanteymoori, Alireza; Kuhn, Tobias; Mei, Hailiang; Ménager, Hervé; Möller, Steffen; Richardson, Robin A.; Robert, Vincent; Soiland-Reyes, Stian; Stevens, Robert; Szaniszlo, Szoke; Verberne, Suzan; Verhoeven, Aswin; Wolstencroft, Katherine (Journal article; Peer reviewed, 2021)
      Scientific data analyses often combine several computational tools in automated pipelines, or workflows. Thousands of such workflows have been used in the life sciences, though their composition has remained a cumbersome ...
    • Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis 

      Möller, Steffen; Prescott, Stuart W.; Wirzenius, Lars; Reinholdtsen, Petter; Chapman, Brad; Prins, Pjotr; Soiland-Reyes, Stian; Klötzl, Fabian; Bagnacani, Andrea; Kalaš, Matúš; Tille, Andreas; Crusoe, Michael R. (Peer reviewed; Journal article, 2017-09)
      Information integration and workflow technologies for data analysis have always been major fields of investigation in bioinformatics. A range of popular workflow suites are available to support analyses in computational ...