Blar i Department of Informatics på dokumenttype "Peer reviewed"
Viser treff 2140 av 412

Bchromatic number: Beyond NPhardness
(Conference object; Peer reviewed; Journal article, 2015)The bchromatic number of a graph G, chi_b(G), is the largest integer k such that G has a kvertex coloring with the property that each color class has a vertex which is adjacent to at least one vertex in each of the other ... 
bColoring Parameterized by CliqueWidth
(Journal article; Peer reviewed, 2021)We provide a polynomialtime algorithm for bColoring on graphs of constant cliquewidth. This unifies and extends nearly all previously known polynomialtime results on graph classes, and answers open questions posed by ... 
Balanced judicious bipartition is fixedparameter tractable
(Journal article; Peer reviewed, 2019)The family of judicious partitioning problems, introduced by Bollobás and Scott to the field of extremal combinatorics, has been extensively studied from a structural point of view for over two decades. This rich realm of ... 
Bidimensionality and Kernels
(Journal article; Peer reviewed, 2020)Bidimensionality theory was introduced by [E. D. Demaine et al., J. ACM, 52 (2005), pp. 866893] as a tool to obtain subexponential time parameterized algorithms on Hminorfree graphs. In [E. D. Demaine and M. Hajiaghayi, ... 
Bifurcation and sensitivity analysis reveal key drivers of multistability in a model of macrophage polarization
(Journal article; Peer reviewed, 2020)In this paper, we present and analyze a mathematical model for polarization of a single macrophage which, despite its simplicity, exhibits complex dynamics in terms of multistability. In particular, we demonstrate that an ... 
Binary Linear Codes With Few Weights From TwotoOne Functions
(Journal article; Peer reviewed, 2021)In this paper, we apply twotoone functions over b F 2n in two generic constructions of binary linear codes. We consider twotoone functions in two forms: (1) generalized quadratic functions; and (2) (x 2t +x) e with ... 
Binding Leverage as a Molecular Basis for Allosteric Regulation
(Peer reviewed; Journal article, 20110915)Allosteric regulation involves conformational transitions or fluctuations between a few closely related states, caused by the binding of effector molecules. We introduce a quantity called binding leverage that measures the ... 
The bio.tools registry of software tools and data resources for the life sciences
(Peer reviewed; Journal article, 20190812)Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a panEuropean enterprise ... 
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains
(Peer reviewed; Journal article, 20140205)Abstract The application of semantic technologies to the integration of biological data and the interoperability of bioinformatics analysis and visualization tools has been the common theme of a series of annual BioHackathons ... 
Bioimage analysis workflows: community resources to navigate through a complex ecosystem [version 1; peer review: 2 approved]
(Journal article; Peer reviewed, 2021)Workflows are the keystone of bioimage analysis, and the NEUBIAS (Network of European BioImage AnalystS) community is trying to gather the actors of this field and organize the information around them. One of its most ... 
biotoolsSchema: a formalized schema for bioinformatics software description
(Journal article; Peer reviewed, 2021)Background Life scientists routinely face massive and heterogeneous data analysis tasks and must find and access the most suitable databases or software in a jungle of webaccessible resources. The diversity of information ... 
BioXSD: the common dataexchange format for everyday bioinformatics web services
(Peer reviewed; Journal article, 2010)Motivation: The worldwide community of life scientists has access to a large number of public bioinformatics databases and tools, which are developed and deployed using diverse technologies and designs. More and more of ... 
Bisection of Bounded Treewidth Graphs by Convolutions
(Journal article; Peer reviewed, 2019)In the Bisection problem, we are given as input an edgeweighted graph G. The task is to find a partition of V(G) into two parts A and B such that A  B <= 1 and the sum of the weights of the edges with one endpoint ... 
A BitVector Differential Model for the Modular Addition by a Constant
(Journal article; Peer reviewed, 2020)ARX algorithms are a class of symmetrickey algorithms constructed by Addition, Rotation, and XOR, which achieve the best software performances in lowend microcontrollers. To evaluate the resistance of an ARX cipher against ... 
Blind search for posttranslational modifications and amino acid substitutions using peptide mass fingerprints from two proteases
(Peer reviewed; Journal article, 20081219)Background: Mass spectrometric analysis of peptides is an essential part of protein identification and characterization, the latter meaning the identification of modifications and amino acid substitutions. There are two ... 
BlockDiagonal and LT Codes for Distributed Computing with Straggling Servers
(Peer reviewed; Journal article, 201903)We propose two coded schemes for the distributed computing problem of multiplying a matrix by a set of vectors. The first scheme is based on partitioning the matrix into submatrices and applying maximum distance separable ... 
Bounds on the nonlinearity of differentially uniform functions by means of their image set size, and on their distance to affine functions
(Journal article; Peer reviewed, 2021)We revisit and take a closer look at a (not so well known) result of a 2017 paper, showing that the differential uniformity of any vectorial function is bounded from below by an expression depending on the size of its image ... 
Building large kcores from sparse graphs
(Journal article; Peer reviewed, 2020)A popular model to measure network stability is the kcore, that is the maximal induced subgraph in which every vertex has degree at least k. For example, kcores are commonly used to model the unraveling phenomena in ... 
Caligus rogercresseyi acetylcholinesterase types and variants: a potential marker for organophosphate resistance
(Peer reviewed; Journal article, 20181030)Background Control of the sea louse Caligus rogercresseyi in the Chilean salmonid industry is reliant on chemical treatments. Azamethiphos was introduced in 2013, although other organophosphates were previously used. In ... 
CCZequivalence of bent vectorial functions and related constructions
(Peer reviewed; Journal article, 20110106)We observe that the CCZequivalence of bent vectorial functions over F2nFn2 (n even) reduces to their EAequivalence. Then we show that in spite of this fact, CCZequivalence can be used for constructing bent functions ...