Now showing items 206-225 of 649

    • Filtering duplicate reads from 454 pyrosequencing data 

      Balzer, Susanne Mignon; Malde, Ketil; Grohme, Markus A.; Jonassen, Inge (Peer reviewed; Journal article, 2013)
      Motivation: Throughout the recent years, 454 pyrosequencing has emerged as an efficient alternative to traditional Sanger sequencing and is widely used in both de novo whole-genome sequencing and metagenomics. Especially ...
    • Filtering of FTLE for Visualizing Spatial Separation in Unsteady 3D Flow 

      Pobitzer, Armin; Peikert, Ronald; Fuchs, Raphael; Theisel, Holger; Hauser, Helwig (Peer reviewed; Journal article, 2012)
      In many cases, feature detection for flow visualization is structured in two phases: first candidate identification, and then filtering. With this paper, we propose to use the directional information contained in the ...
    • Finding even subgraphs even faster 

      Goyal, Prachi; Misra, Pranabendu; Panolan, Fahad; Philip, Geevarghese; Saurabh, Saket (Conference object; Peer reviewed; Journal article, 2015)
      Problems of the following kind have been the focus of much recent research in the realm of parameterized complexity: Given an input graph (digraph) on n vertices and a positive integer parameter k, find if there exist k ...
    • Finding Induced Subgraphs via Minimal Triangulations 

      Fomin, Fedor; Villanger, Yngve (Conference object; Peer reviewed; Journal article, 2010)
      Potential maximal cliques and minimal separators are combinatorial objects which were introduced and studied in the realm of minimal triangulation problems in- cluding Minimum Fill-in and Treewidth. We discover unexpected ...
    • Finding k Disjoint Triangles in an Arbitrary Graph 

      Fellows, Mike; Heggernes, Pinar; Rosamond, Frances; Sloper, Christian; Telle, Jan Arne (Conference object, 2004)
    • Finding Resource Bounds in the Presence of Explicit Deallocation 

      Truong, Anh Hoang; Bezem, Marcus A. (Journal article, 2005-10-17)
      A software program requesting a resource that is not available usually raises an out-of-resource exception. Component software is software that has been assembled from standardized, reusable components which, in turn, may ...
    • Finite and Confident Teaching in Expectation: Sampling from Infinite Concept Classes 

      Hernández-Orallo, José; Telle, Jan Arne (Frontiers in Artificial Intelligence and Applications;325, Chapter, 2020)
      We investigate the teaching of infinite concept classes through the effect of the learning prior (which is used by the learner to derive posteriors giving preference of some concepts over others and by the teacher to devise ...
    • Firewalls: Enforcement of Security Policy in networks 

      Nordås, Harald (Master thesis, 2014-11-20)
      Firewalls are set up to protect computer networks. Originally, networks were just coupled together, in order to achieve connection. With the ability to reach networks all over the world, one started to denote this the ...
    • Fixed Parameter Set Splitting, Linear Kernel and Improved Running Time 

      Lokshtanov, Daniel; Sloper, Christian (2005)
    • A Fixed-Parameter Perspective on #BIS 

      Curticapean, Radu; Dell, Holger; Fomin, Fedor; Goldberg, Leslie Ann; Lapinskas, John (Peer reviewed; Journal article, 2019-07-18)
      The problem of (approximately) counting the independent sets of a bipartite graph (#BIS) is the canonical approximate counting problem that is complete in the intermediate complexity class #RHΠ1. It is believed that #BIS ...
    • Floating Fault Analysis of Trivium 

      Hojsík, Michal; Rudolf, Bohuslav (Lecture Notes in Computer Science; 5365, Chapter; Peer reviewed, 2008)
      One of the eSTREAM final portfolio ciphers is the hardwareoriented stream cipher Trivium. It is based on 3 nonlinear feedback shift registers with a linear output function. Although Trivium has attached a lot of interest, ...
    • Formulas as programs 

      Burrows, Eva (Master thesis, 2003)
      Alma-0 is a programming language supporting declarative programming, which combines the advantages of imperative and logic programming paradigms. This work explores declarative programming by extending the interpretation ...
    • FPT Algorithms for Diverse Collections of Hitting Sets 

      Baste, Julien; Jaffke, Lars; Masařík, Tomáš; Philip, Geevarghese; Rote, Günter (Peer reviewed; Journal article, 2019-11-27)
      In this work, we study the d-Hitting Set and Feedback Vertex Set problems through the paradigm of finding diverse collections of r solutions of size at most k each, which has recently been introduced to the field of ...
    • A framework for integrating data, models and visualisation tools to understand fish migration pattern 

      Frøyen, Sebastian; Nes, Torkel Kårstad (Master thesis, 2019-06-29)
    • FreeContact: Fast and free software for protein contact prediction from residue co-evolution 

      Kaján, László; Hopf, Thomas A.; Kalaš, Matúš; Marks, Debora S.; Rost, Burkhard (Peer reviewed; Journal article, 2014-03-26)
      Background: 20 years of improved technology and growing sequences now renders residue-residue contact constraints in large protein families through correlated mutations accurate enough to drive de novo predictions of protein ...
    • FreeContact: fast and free software for protein contact prediction from residue co-evolution 

      Kaján, László; Hopf, Thomas A.; Kalaš, Matúš; Marks, Debora S.; Rost, Burkhard (Peer reviewed; Journal article, 2014-03-26)
      Background: 20 years of improved technology and growing sequences now renders residue-residue contact constraints in large protein families through correlated mutations accurate enough to drive de novo predictions of protein ...
    • Fusing a Transformation Language with an Open Compiler 

      Kalleberg, Karl Trygve; Visser, Eelco (Peer reviewed; Journal article, 2008-04-01)
      Program transformation systems provide powerful analysis and transformation frameworks as well as concise languages for language processing, but instantiating them for every subject language is an arduous task, most often ...
    • Gamification To Promote Guideline Training In Health Care 

      Ebbesvik, Ben-Richard Sletten (Master thesis, 2019-06-29)
      Clinical practice guidelines are recipes for how clinician can identify a specific medical condition in a patient, how to manage and provide treatment for such a patient. These are evidence based statements, which includes ...
    • GAPGOM—an R package for gene annotation prediction using GO metrics 

      van Mourik, Casper; Ehsani, Rezvan; Drabløs, Finn (Journal article; Peer reviewed, 2021)
      Objective Properties of gene products can be described or annotated with Gene Ontology (GO) terms. But for many genes we have limited information about their products, for example with respect to function. This is ...