Now showing items 597-616 of 915

    • On Two Fundamental Problems on APN Power Functions 

      Budaghyan, Lilya; Calderini, Marco; Carlet, Claude Michael; Davidova, Diana; Kaleyski, Nikolay Stoyanov (Journal article; Peer reviewed, 2022)
      The six infinite families of power APN functions are among the oldest known instances of APN functions, and it has been conjectured in 2000 that they exhaust all possible power APN functions. Another long-standing open ...
    • On width measures and topological problems on semi-complete digraphs 

      Fomin, Fedor; Pilipczuk, Michal (Peer reviewed; Journal article, 2019)
      The topological theory for semi-complete digraphs, pioneered by Chudnovsky, Fradkin, Kim, Scott, and Seymour [10], [11], [12], [28], [43], [39], concentrates on the interplay between the most important width measures — ...
    • One byte at a time: evidencing the quality of clinical service next-generation sequencing for germline and somatic variants 

      Gutowska-Ding, Maria Weronika; Deans, Zandra C.; Roos, Christophe; Matilainen, Jukka; Khawaja, Farrah; Brügger, Kim; Ahn, Jo Wook; Boustred, Christopher; Patton, Simon J. (Journal article; Peer reviewed, 2020)
      Next-generation sequencing (NGS) is replacing other molecular techniques to become the de facto gene diagnostics approach, transforming the speed of diagnosis for patients and expanding opportunities for precision medicine. ...
    • The Ontology Lookup Service: bigger and better 

      Côté, Richard G.; Reisinger, Florian; Martens, Lennart; Barsnes, Harald; Vizcaíno, Juan Antonio; Hermjakob, Henning (Peer reviewed; Journal article, 2010-05-11)
      The Ontology Lookup Service (OLS; http://www.ebi .ac.uk/ols) has been providing several means to query, browse and navigate biomedical ontologies and controlled vocabularies since it first went into production 4 years ago, ...
    • Optimal preparation of graph states 

      Cabello, Adán; Danielsen, Lars Eirik; López-Tarrida, Antonio J.; Portillo, José R. (Peer reviewed; Journal article, 2011-04-12)
      We show how to prepare any graph state of up to 12 qubits with: (a) the minimum number of controlled-Z gates, and (b) the minimum preparation depth. We assume only one-qubit and controlled-Z gates. The method exploits the ...
    • Optimal ternary cyclic codes with minimum distance four and five 

      Li, Nian; Li, Chunlei; Helleseth, Tor; Ding, Cunsheng; Tang, Xiaohu (Journal article, 2014-11)
      Cyclic codes are an important subclass of linear codes and have wide applications in data storage systems, communication systems and consumer electronics. In this paper, two families of optimal ternary cyclic codes are ...
    • Optimization issues in medical imaging and fiber-tracking 

      Bergmann, Ørjan (Doctoral thesis, 2008-02-27)
      Fiber tracking is a relatively recent methodology, made possible by access to new highly advanced MR scanners able to produce high-quality diffusion tensor images (DTI), which promises clinicians a possibility to observe ...
    • Optimization Models for Turbine Location in Wind Farms 

      Haugland, Jan Kristian (Master thesis, 2012-05-24)
      The topic of this thesis is wind farm optimization. The goal is to be able to decide where to install wind turbines within a given region in order to maximize the power output in two different scenarios: For a fixed number ...
    • Optimization of reliable cyclic cable layouts in offshore wind farms 

      Klein, Arne; Haugland, Dag (Peer reviewed; Journal article, 2020)
      A novel approach for optimizing reliable cable layouts in offshore wind farms is presented. While optimization models traditionally are designed to suggest acyclic cable routes, those developed in this work recognize that ...
    • Optimization Problems in Communication Networks and Multi-Agent Path Finding 

      Ivanova, Marika (Doctoral thesis, 2019-09-13)
      This dissertation is a compilation of six research papers that are focused on three dif- ferent topics summarized in the text. The first three papers address NP-hard problems arising in ad-hoc wireless com- munication ...
    • Optimizing Approximate Weighted Matching on Nvidia Kepler K40 

      Naim, Md.; Manne, Fredrik; Halappanavar, Mahantesh; Tumeo, Antonino; Langguth, Johannes (Chapter; Peer reviewed, 2018)
      Matching is a fundamental graph problem with numerous applications in science and engineering. While algorithms for computing optimal matchings are difficult to parallelize, approximation algorithms on the other hand ...
    • Order Reconfiguration Under Width Constraints 

      Arrighi, Emmanuel Jean Paul Pierre; Fernau, Henning; Oliveira, Mateus De Oliveira; Wolf, Petra (Journal article; Peer reviewed, 2021)
      In this work, we consider the following order reconfiguration problem: Given a graph G together with linear orders ω and ω' of the vertices of G, can one transform ω into ω' by a sequence of swaps of adjacent elements in ...
    • Order Reconfiguration under Width Constraints 

      Arrighi, Emmanuel Jean Paul Pierre; Fernau, Henning; De Oliveira Oliveira, Mateus; Wolf, Petra Henrike Karola (Journal article; Peer reviewed, 2023)
      In this work, we consider the following order reconfiguration problem: Given a graph G together with linear orders ω and ω′ of the vertices of G, can one transform ω into ω′ by a sequence of swaps of adjacent elements in ...
    • Order-Related Problems Parameterized by Width 

      Arrighi, Emmanuel (Doctoral thesis, 2022-05-25)
      In the main body of this thesis, we study two different order theoretic problems. The first problem, called Completion of an Ordering, asks to extend a given finite partial order to a complete linear order while respecting ...
    • ORFik: a comprehensive R toolkit for the analysis of translation 

      Tjeldnes, Håkon; Labun, Kornel; Torres Cleuren, Yamila Nicole; Chyzynska, Katarzyna; Swirski, Michal; Valen, Eivind Dale (Journal article; Peer reviewed, 2021)
      Background With the rapid growth in the use of high-throughput methods for characterizing translation and the continued expansion of multi-omics, there is a need for back-end functions and streamlined tools for processing, ...
    • Ouroboros-E: An efficient Lattice-based Key-Exchange Protocol 

      Deneuville, Jean-Christophe; Gaborit, Philippe; Guo, Qian; Johansson, Thomas (Peer reviewed; Journal article, 2018)
      The Bit Flipping algorithm is a hard decision decoding algorithm originally designed by Gallager in 1962 to decode Low Density Parity Check Codes (LDPC). It has recently proved to be much more versatile, for Moderate Parity ...
    • Output-Sensitive Filtering of Streaming Volume Data 

      Šoltészová, Veronika; Birkeland, Åsmund; Stoppel, Sergej; Viola, Ivan; Bruckner, Stefan (Peer reviewed; Journal article, 2016-02)
      Real-time volume data acquisition poses substantial challenges for the traditional visualization pipeline where data enhancement is typically seen as a pre-processing step. In the case of 4D ultrasound data, for instance, ...
    • P3 problem and Magnolia language: Specializing array computations for emerging architectures 

      Chetioui, Benjamin; Larnøy, Marius Kleppe; Järvi, Jaakko Timo Henrik; Haveraaen, Magne; Mullin, Lenore (Journal article; Peer reviewed, 2022)
      The problem of producing portable high-performance computing (HPC) software that is cheap to develop and maintain is called the P3 (performance, portability, productivity) problem. Good solutions to the P3 problem have ...
    • Packing arc-disjoint cycles in tournaments 

      Bessy, Stephane; Bougeret, Marin; Krithika, R; Sahu, Abhishek; Saurabh, Saket; Thiebaut, Jocelyn; Zehavi, Meirav (Journal article; Peer reviewed, 2019)
      A tournament is a directed graph in which there is a single arc between every pair of distinct vertices. Given a tournament T on n vertices, we explore the classical and parameterized complexity of the problems of determining ...