• Addressing class imbalance in deep learning for acoustic target classification 

      Pala, Ahmet; Oleynik, Anna; Utseth, Ingrid; Handegard, Nils Olav (Journal article; Peer reviewed, 2023)
      Acoustic surveys provide important data for fisheries management. During the surveys, ship-mounted echo sounders send acoustic signals into the water and measure the strength of the reflection, so-called backscatter. ...
    • Annotating otoliths with a deep generative model 

      Bojesen, Troels Arnfred; Denechaud, Côme; Malde, Ketil (Journal article; Peer reviewed, 2023)
      Otoliths are a central information source for fish ecology and stock management, conveying important data about age and other life history for individual fish. Traditionally, interpretation of otoliths has required skilled ...
    • Aquaculture-driven evolution: distribution of pyrethroid resistance in the salmon louse throughout the North Atlantic in the years 2000–2017 

      Fjørtoft, Helene Børretzen; Nilsen, Frank; Besnier, Francois; Espedal, Per Gunnar; Stene, Anne; Tveten, Ann-Kristin; Bjørn, Pål Arne; Aspehaug, Vidar; Glover, Kevin (Journal article; Peer reviewed, 2020)
      The parasitic salmon louse, and its documented resistance to chemotherapeutants, represents the most persistent environmental challenge to global salmonid aquaculture. We used a genetic marker associated with pyrethroid ...
    • A combination of genetic and phenotypic characterization of spring- and autumn-spawning herring suggests gene flow between populations 

      Berg, Florian; Østgaard, Hedda Dugstad; Slotte, Aril; Andersson, Leif; Folkvord, Arild (Journal article; Peer reviewed, 2020)
      Atlantic herring (Clupea harengus) has complex population structure and dynamics including diverse life histories and spawning times with spring and autumn spawning as the most common modes. Originally, spawning herring ...
    • A deep learning-based method to identify and count pelagic and mesopelagic fishes from trawl camera images 

      Allken, Vaneeda; Rosen, Shale Pettit; Handegard, Nils Olav; Malde, Ketil (Journal article; Peer reviewed, 2021)
      Fish counts and species information can be obtained from images taken within trawls, which enables trawl surveys to operate without extracting fish from their habitat, yields distribution data at fine scale for better ...
    • Density-independent mortality at early life stages increases the probability of overlooking an underlying stock-recruitment relationship 

      Zimmermann, Fabian; Enberg, Katja; Mangel, Marc (Journal article; Peer reviewed, 2021)
      Abstract Beverton and Holt’s (1957) monograph contributed a widely used stock–recruitment relationship (BH-SRR) to fisheries science. However, because of variation around a presumed relationship between spawning biomass ...
    • Discards of cod (Gadus morhua) in the Norwegian coastal fisheries: improving past and future estimates 

      Berg, Hilde Sofie Fantoft; Clegg, Thomas L; Blom, Geir; Kolding, Jeppe; Ono, Kotaro; Nedreaas, Kjell Harald (Journal article; Peer reviewed, 2022)
      Discarding can be an unknown source of biases and uncertainties in stock assessments. Discarding patterns and quantities vary so a routine methodology for estimating discards is important to give a better picture of total ...
    • The effects of spatial and temporal variations in spawning on offspring survival in Northeast Arctic cod 

      Endo, Clarissa; Skogen, Morten D.; Stige, Leif Christian; Hjøllo, Solfrid Sætre; Vikebø, Frode Bendiksen (Journal article; Peer reviewed, 2024)
      Climate change and harvesting result in temporal and spatial changes and variability in spawning, and thus in offspring ambient drift conditions. As a result, variable survival of offspring and thereby in recruitment are ...
    • Eight decades of adaptive changes in herring reproductive investment: the joint effect of environment and exploitation 

      Claireaux, Marion; dos Santos Schmidt, Thassya Christina; Olsen, Esben Moland; Slotte, Aril; Varpe, Øystein; Heino, Mikko Petteri; Enberg, Katja (Journal article; Peer reviewed, 2021)
      Reproductive investment is a central trait for population dynamics and productivity. Fishing and environmental variations are major drivers affecting population structure, dynamics, and adaptation of life-history and ...
    • The evolving story of catadromy in the European eel (Anguilla anguilla) 

      Durif, Caroline; Arts, M.; Bertolini, F.; Cresci, Alessandro; Daverat, F.; Karlsbakk, Egil Erlingsson; Koprivnikar, J.; Moland, Even; Olsen, Esben Moland; Parzanini, C.; Power, M.; Rohtla, Mehis; Skiftesvik, Anne Berit; Thorstad, Eva Bonsak; Vøllestad, Leif Asbjørn; Browman, Howard (Journal article; Peer reviewed, 2023)
      Anguillid eels were once considered to be the classic example of catadromy. However, alternative life cycles have been reported, including skipping the freshwater phase and habitat shifting between fresh, brackish, and ...
    • Flexible behaviour in a mesopelagic fish (Maurolicus muelleri) 

      Klevjer, Thor Aleksander; Røstad, Anders; Aksnes, Dag Lorents; Kaartvedt, Stein; Christiansen, Svenja (Journal article; Peer reviewed, 2021)
      Variability of mesopelagic scattering layers is often attributed to environmental conditions or multi-species layer composition. Yet, little is known about variation in behaviour among the individuals forming scattering ...
    • Gaussian mixture models reveal highly diverse targeting tactics in a coastal fishing fleet 

      Liu, Xiaozi; Hansen, Cecilie; Nedreaas, Kjell Harald; Stockhausen, Hagen; Heino, Mikko Petteri (Journal article; Peer reviewed, 2022)
      Fishermen make repeated choices with respect to when, where, and how to catch their target species. While these targeting tactics—and the factors shaping them—are known to fishers and some experts, knowledge about them is ...
    • Gender and early career status: variables of participation at an international marine science conference 

      Johannesen, E.; Barz, F.; Dankel, Dorothy Jane; Kraak, S.B.M. (Journal article; Peer reviewed, 2023)
      Conference participation is an important part of academic practice and contributes to building scientific careers. Investigating demographic differences in conference participation may reveal factors contributing to the ...
    • Geographic distribution, abundance, diet, and body size of invasive pink salmon (Oncorhynchus gorbuscha) in the Norwegian and Barents Seas, and in Norwegian rivers 

      Diaz Pauli, Beatriz; Berntsen, Johan Henrik Hårdensson; Thorstad, Eva Bonsak; Homrum, Eydna í; Lusseau, Susan Mærsk; Wennevik, Vidar; Utne, Kjell Rong (Journal article; Peer reviewed, 2022)
      We report for the first time the geographic distribution, abundance, diet, and body size of invasive pink salmon (Oncorhynchus gorbuscha) in the Norwegian and Barents Seas and Norwegian coast and rivers. We found that pink ...
    • How trophic cascades and photic zone nutrient content interact to generate basin-scale differences in the microbial food web 

      Thingstad, Tron Frede (Journal article; Peer reviewed, 2020)
      In linear food chains, resource and predator control produce positive and negative correlations, respectively, between biomass at adjacent trophic levels. These simple relationships become more complex in food webs that ...
    • Infaunal and epifaunal secondary production in the Barents Sea, with focus on snow crab (Chionoecetes opilio) prey resources and consumption 

      Holte, Børge; Fuhrmann, Mona Maria; Tandberg, Anne Helene S.; Hvingel, Carsten; Hjelset, Ann Merete (Journal article; Peer reviewed, 2022)
      Since the first observation of snow crab (Chionoecetes opilio) in the Barents Sea in 1996, the population has increased significantly, supporting a commercial fishery on the Norwegian shelf since 2012. To investigate whether ...
    • Integrating human dimensions in decadal-scale prediction for marine social–ecological systems: lighting the grey zone 

      Melbourne-Thomas, Jess; Tommasi, Desiree; Gehlen, Marion; Murphy, Eugene J.; Beckensteiner, Jennifer; Bravo, Francisco; Eddy, Tyler D; Fischer, Mibu; Fulton, Elizabeth; Gogina, Mayya; Hofmann, Eileen; Ito, Maysa; Mynott, Sara; Ortega-Cisneros, Kelly; Osiecka, Anna N; Payne, Mark R.; Saldívar-Lucio, Romeo; Scherrer, Kim Josefin Niklasdotter (Journal article; Peer reviewed, 2023)
      The dynamics of marine systems at decadal scales are notoriously hard to predict—hence references to this timescale as the “grey zone” for ocean prediction. Nevertheless, decadal-scale prediction is a rapidly developing ...
    • Machine learning in marine ecology: an overview of techniques and applications 

      Rubbens, Peter; Brodie, Stephanie; Cordier, Tristan; Desto Barcellos, Diogo; DeVos, Paul; Fernandes-Salvador, Jose A; Fincham, Jennifer; Gomes, Alessandra; Handegard, Nils Olav; Howell, Kerry L.; Jamet, Cédric; Kartveit, Kyrre Heldal; Moustahfid, Hassan; Parcerisas, Clea; Politikos, Dimitris V.; Sauzède, Raphaëlle; Sokolova, Maria; Uusitalo, Laura; Van den Bulcke, Laure; van Helmond, Aloysius; Watson, Jordan T.; Welch, Heather; Beltran-Perez, Oscar; Chaffron, Samuel; Greenberg, David S.; Kühn, Bernhard; Kiko, Rainer; Lo, Madiop; Lopes, Rubens M.; Möller, Klas Ove; Michaels, William; Pala, Ahmet; Romagnan, Jean-Baptiste; Schuchert, Pia; Seydi, Vahid; Villasante, Sebastian; Malde, Ketil; Irisson, Jean-Olivier (Journal article; Peer reviewed, 2023)
      Machine learning covers a large set of algorithms that can be trained to identify patterns in data. Thanks to the increase in the amount of data and computing power available, it has become pervasive across scientific ...
    • Mixed-stock analysis of Atlantic herring (Clupea harengus): a tool for identifying management units and complex migration dynamics 

      Bekkevold, Dorte; Berg, Florian; Polte, Patrick; Bartolino, Valerio; Ojaveer, Henn; Mosegaard, Henrik; Farrell, Edward D.; Fedotova, Jelena; Hemmer-Hansen, Jakob; Huwer, Bastian; Trijoulet, Vanessa; Moesgaard Albertsen, Christoffer; Fuentes-Pardo, Angela P.; Gröhsler, Tomas; Pettersson, Mats; Jansen, Teunis; Folkvord, Arild; Andersson, Leif (Journal article; Peer reviewed, 2023)
      We developed and validated a mixed-stock analysis (MSA) method with 59 single-nucleotide polymorphisms selected from genome-wide data to assign individuals to populations in mixed-stock samples of Atlantic herring from the ...
    • Model-informed classification of broadband acoustic backscatter from zooplankton in an in situ mesocosm 

      Dunn, Muriel Barbara; McGowan-Yallop, Chelsey; Pedersen, Geir; Falk-Petersen, Stig; Daase, Malin Hildegard Elisabeth; Last, Kim; Langbehn, Tom; Fielding, Sophie; Brierley, Andrew S.; Cottier, Finlo Robert; Basedow, Sünnje Linnéa; Camus, Lionel; Geoffroy, Maxime (Journal article; Peer reviewed, 2023)
      Classification of zooplankton to species with broadband echosounder data could increase the taxonomic resolution of acoustic surveys and reduce the dependence on net and trawl samples for ‘ground truthing’. Supervised ...