Development and application of methods for the analysis of microarray gene expression data

Paper I: Reprinted from Nucleic Acids Research, 32(3 e34), Bù, Trond Hellem; Dysvik, Bjarte and Inge Jonassen, LSimpute: accurate estimation of missing values in microarray data with least squares methods. Copyright 2004 Oxford University Press. Published version available at: http://dx.doi.org/10.1093/nar/gnh026

Paper II: Reprinted from Clinical Cancer Research, 12(4), Dysvik, Bjarte; Vasstrand, Endre N.; Løvlie, Roger; Elgindi, Osman A-Aziz; Kross, Kenneth W.; Aarstad, Hans J.; Johannessen, Anne Chr.; Jonassen, Inge and Salah O. Ibrahim, Gene Expression Profiles of Head and Neck Carcinomas from Sudanese and Norwegian Patients Reveal Common Biological Pathways Regardless of Race and Lifestyle, pp. 1109-1120. Copyright 2006 American Association for Cancer Research. Published version available at: http://clincancerres.aacrjournals.org/cgi/content/full/12/4/1109

Paper III: Dysvik, Bjarte; Hellem Bø, Trond and Inge Jonassen, Mixture models applied to microarray gene expression data. Pre-print.

Paper IV: Current Protocols in Bioinformatics, 7.3.1-7.3.22, Inge Jonassen and Bjarte Dyrsvik, Analysis of Gene-Expression Date Using J-Express. Copyright 2003 John Wiley Sons, Ltd. Published version available at: http://www.does.org/cp/bioinfo.html

Paper V: Suhr, Mai Lill; Dysvik, Bjarte; Bruland, Ove; Warnakulasauriya, Amaratunga; Saman, Asoka N.; Jonassen, Inge; Vasstrand, Endre N. and Salah O. Ibrahim, Gene Expression Profile of Oral Squamous Cell Carcinomas from Sri Lankan Betel Quid Users. Pre-print.

Paper VI: Eichner, Christiane; Frost, Petter; Dysvik, Bjarte; Kristiansen, Bjørn; Jonassen, Inge and Frank Nilsen, Identification of transcripts regulated during sexual maturation and egg production inadult female salmon lice Lepeophtheirus salmonis (Crustacea, Copopoda), using ESTsequencing and microarray analysis. Pre-print. Access is closed due to publisher restrictions

Utgiver

The University of Bergen