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dc.contributor.authorNarrevik, Tommyeng
dc.date.accessioned2009-07-15T13:24:25Z
dc.date.available2009-07-15T13:24:25Z
dc.date.issued2008-11-27eng
dc.date.submitted2008-11-27eng
dc.identifier.urihttps://hdl.handle.net/1956/3360
dc.description.abstractMass spectrometry(MS) have become an increasingly popular analysis method for high throughput experiments on proteins in biology. SILAC(stable isotope labeling by amino acids in cell culture) is a method within MS that uses labels to differentiate between the same protein from two cell cultures(protein pairs) of the same organism. To identify the protein pairs in SILAC MS/MS is used. The current/automatic method for MS/MS uses the most intense peaks from each single MS for the MS/MS analysis. This often result in incomplete pairs, and proteins that have a low abundance gets ignored. We created a program able to identify these pairs, and the researcher can use the data from it as an inclusion list for the MS/MS run. The program should be easy to maintain and use for other MS data analysis.en_US
dc.format.extent2723301 byteseng
dc.format.mimetypeapplication/pdfeng
dc.language.isoengeng
dc.publisherThe University of Bergenen_US
dc.subjectSILACeng
dc.subjectMSeng
dc.subjectMS/MSeng
dc.subjectLabeledeng
dc.titleMassAnalyzer, a program to help find labeled peptides and compare them to their unlabeled counterparts in a SILAC experimenten_US
dc.typeMaster thesis
dc.rights.holderThe authoren_US
dc.rights.holderCopyright the author. All rights reserveden_US
dc.description.degreeMaster i Informatikk - bioinformatikken_US
dc.description.localcodeMAMN-INFBI
dc.description.localcodeINFBI
dc.subject.nus754115eng
dc.subject.nsiVDP::Teknologi: 500::Bioteknologi: 590nob
fs.subjectcodeINFBI


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