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dc.contributor.authorKatayama, Toshiakieng
dc.contributor.authorWilkinson, Mark D.eng
dc.contributor.authorAoki-Kinoshita, Kiyoko F.eng
dc.contributor.authorKawashima, Shuichieng
dc.contributor.authorYamamoto, Yasunorieng
dc.contributor.authorYamaguchi, Atsukoeng
dc.contributor.authorOkamoto, Shinobueng
dc.contributor.authorKawano, Shineng
dc.contributor.authorKim, Jin-Dongeng
dc.contributor.authorWang, Yueeng
dc.contributor.authorWu, Hongyaneng
dc.contributor.authorKano, Yoshinobueng
dc.contributor.authorOno, Hiromasaeng
dc.contributor.authorBono, Hidemasaeng
dc.contributor.authorKocbek, Simoneng
dc.contributor.authorAerts, Janeng
dc.contributor.authorAkune, Yukieeng
dc.contributor.authorAntezana, Erickeng
dc.contributor.authorArakawa, Kazuharueng
dc.contributor.authorAranda, Brunoeng
dc.contributor.authorBaran, Joachimeng
dc.contributor.authorBolleman, Jerveneng
dc.contributor.authorBonnal, Raoul J. P.eng
dc.contributor.authorButtigieg, Pier Luigieng
dc.contributor.authorCampbell, Matthew P.eng
dc.contributor.authorChen, Yi-aneng
dc.contributor.authorChiba, Hirokazueng
dc.contributor.authorCock, Peter J. A.eng
dc.contributor.authorCohen, K. Bretonneleng
dc.contributor.authorConstantin, Alexandrueng
dc.contributor.authorDuck, Gerainteng
dc.contributor.authorDumontier, Micheleng
dc.contributor.authorFujisawa, Takatomoeng
dc.contributor.authorFujiwara, Toyofumieng
dc.contributor.authorGoto, Naohisaeng
dc.contributor.authorHoehndorf, Roberteng
dc.contributor.authorIgarashi, Yoshinobueng
dc.contributor.authorItaya, Hidetoshieng
dc.contributor.authorIto, Maorieng
dc.contributor.authorIwasaki, Watarueng
dc.contributor.authorKalaš, Matúšeng
dc.contributor.authorKatoda, Takeoeng
dc.contributor.authorKim, Taehongeng
dc.contributor.authorKokubu, Annaeng
dc.contributor.authorKomiyama, Yusukeeng
dc.contributor.authorKotera, Masaakieng
dc.contributor.authorLaibe, Camilleeng
dc.contributor.authorLapp, Hilmareng
dc.contributor.authorLütteke, Thomaseng
dc.contributor.authorMarshall, M. Scotteng
dc.contributor.authorMori, Takaakieng
dc.contributor.authorMori, Hiroshieng
dc.contributor.authorMorita, Mizukieng
dc.contributor.authorMurakami, Katsuhikoeng
dc.contributor.authorNakao, Mitsuterueng
dc.contributor.authorNarimatsu, Hisashieng
dc.contributor.authorNishide, Hiroyoeng
dc.contributor.authorNishimura, Yosukeeng
dc.contributor.authorNyström-Persson, Johaneng
dc.contributor.authorOgishima, Soichieng
dc.contributor.authorOkamura, Yasunobueng
dc.contributor.authorOkuda, Shujiroeng
dc.contributor.authorOshita, Kazukieng
dc.contributor.authorPacker, Nicki Heng
dc.contributor.authorPrins, Pjotreng
dc.contributor.authorRanzinger, Reneeng
dc.contributor.authorRocca-Serra, Philippeeng
dc.contributor.authorSansone, Susannaeng
dc.contributor.authorSawaki, Hiromichieng
dc.contributor.authorShin, Sung-Hoeng
dc.contributor.authorSplendiani, Andreaeng
dc.contributor.authorStrozzi, Francescoeng
dc.contributor.authorTadaka, Shueng
dc.contributor.authorToukach, Philipeng
dc.contributor.authorUchiyama, Ikuoeng
dc.contributor.authorUmezaki, Masahitoeng
dc.contributor.authorVos, Rutgereng
dc.contributor.authorWhetzel, Patricia L.eng
dc.contributor.authorYamada, Issakueng
dc.contributor.authorYamasaki, Chisatoeng
dc.contributor.authorYamashita, Riueng
dc.contributor.authorYork, William S.eng
dc.contributor.authorZmasek, Christian M.eng
dc.contributor.authorKawamoto, Shokoeng
dc.contributor.authorTakagi, Toshihisaeng
dc.date.accessioned2014-09-22T12:53:35Z
dc.date.available2014-09-22T12:53:35Z
dc.date.issued2014-02-05eng
dc.identifier.issn2041-1480en_US
dc.identifier.urihttps://hdl.handle.net/1956/8517
dc.description.abstractAbstract The application of semantic technologies to the integration of biological data and the interoperability of bioinformatics analysis and visualization tools has been the common theme of a series of annual BioHackathons hosted in Japan for the past five years. Here we provide a review of the activities and outcomes from the BioHackathons held in 2011 in Kyoto and 2012 in Toyama. In order to efficiently implement semantic technologies in the life sciences, participants formed various sub-groups and worked on the following topics: Resource Description Framework (RDF) models for specific domains, text mining of the literature, ontology development, essential metadata for biological databases, platforms to enable efficient Semantic Web technology development and interoperability, and the development of applications for Semantic Web data. In this review, we briefly introduce the themes covered by these sub-groups. The observations made, conclusions drawn, and software development projects that emerged from these activities are discussed.en_US
dc.language.isoengeng
dc.publisherBioMed Centralen_US
dc.rightsAttribution CC BYeng
dc.rights.urihttp://creativecommons.org/licenses/by/2.0eng
dc.subjectBioHackathon
dc.subjectBioinformatics
dc.subjectSemantic Web
dc.subjectWeb services
dc.subjectOntology
dc.subjectVisualization
dc.subjectKnowledge representation
dc.subjectDatabases
dc.subjectSemantic interoperability
dc.subjectData models
dc.subjectData sharing
dc.subjectData integration
dc.titleBioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domainsen_US
dc.typePeer reviewed
dc.typeJournal article
dc.date.updated2014-04-07T23:18:54Z
dc.description.versionPeer Reviewed
dc.description.versionpublishedVersionen_US
dc.rights.holderToshiaki Katayama et al.; licensee BioMed Central Ltd.en_US
dc.rights.holderCopyright 2014 Katayama et al.; licensee BioMed Central Ltd.en_US
dc.source.articlenumber5
dc.identifier.doihttps://doi.org/10.1186/2041-1480-5-5
dc.source.journalJournal of Biomedical Semantics
dc.source.405


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