• Bifurcation and sensitivity analysis reveal key drivers of multistability in a model of macrophage polarization 

      Frank, Anna-Simone; Larripa, Kamila; Ryu, Hwayeon; Snodgrass, Ryan; Röblitz, Susanna (Journal article; Peer reviewed, 2020)
      In this paper, we present and analyze a mathematical model for polarization of a single macrophage which, despite its simplicity, exhibits complex dynamics in terms of multistability. In particular, we demonstrate that an ...
    • The bigger, the better? Volume measurements of parasites and hosts: Parasitic barnacles (Cirripedia, Rhizocephala) and their decapod hosts 

      Nagler, Christina; Hornig, Marie K; Haug, Joachim T; Noever, Christoph; Høeg, Jens T.; Glenner, Henrik (Peer reviewed; Journal article, 2017-07-05)
      Rhizocephala, a group of parasitic castrators of other crustaceans, shows remarkable morphological adaptations to their lifestyle. The adult female parasite consists of a body that can be differentiated into two distinct ...
    • Bimolecular Coupling in Olefin Metathesis: Correlating Structure and Decomposition for Leading and Emerging Ruthenium−Carbene Catalysts 

      Nascimento, Daniel L.; Foscato, Marco; Occhipinti, Giovanni; Jensen, Vidar Remi; Fogg, Deryn Elizabeth (Journal article; Peer reviewed, 2021)
      Bimolecular catalyst decomposition is a fundamental, long-standing challenge in olefin metathesis. Emerging ruthenium–cyclic(alkyl)(amino)carbene (CAAC) catalysts, which enable breakthrough advances in productivity and ...
    • Binary domain classification for Norwegian language in task-oriented dialogue systems 

      Evensen, Adrian Tvilde (Master thesis, 2022-09-01)
      Dialogue systems have gained more attention in recent years and have been called “the new app”. This is much due to the advancement in deep learning, more precisely in Natural Language Processing (NLP). An additional factor ...
    • Binary Linear Codes With Few Weights From Two-to-One Functions 

      Li, Kangquan; Li, Chunlei; Helleseth, Tor; Qu, Longjiang (Journal article; Peer reviewed, 2021)
      In this paper, we apply two-to-one functions over b F 2n in two generic constructions of binary linear codes. We consider two-to-one functions in two forms: (1) generalized quadratic functions; and (2) (x 2t +x) e with ...
    • Binary time series classification with Bayesian convolutional neural networks when monitoring for marine gas discharges 

      Gundersen, Kristian; Alendal, Guttorm; Oleynik, Anna; Blaser, Nello (Journal article; Peer reviewed, 2020-06-19)
      The world’s oceans are under stress from climate change, acidification and other human activities, and the UN has declared 2021–2030 as the decade for marine science. To monitor the marine waters, with the purpose of ...
    • Binding Leverage as a Molecular Basis for Allosteric Regulation 

      Mitternacht, Simon; Berezovsky, Igor N. (Peer reviewed; Journal article, 2011-09-15)
      Allosteric regulation involves conformational transitions or fluctuations between a few closely related states, caused by the binding of effector molecules. We introduce a quantity called binding leverage that measures the ...
    • Binding Specificity of ASHH2 CW Domain Toward H3K4me1 Ligand Is Coupled to Its Structural Stability Through Its α1-Helix 

      Bril'kov, Maxim; Dobrovolska, Olena; Ødegård-Fougner, Øyvind; Turcu, Diana Cornelia; Strømland, Øyvind; Underhaug, Jarl; Aasland, Rein; Halskau, Øyvind (Journal article; Peer reviewed, 2022-04-13)
      The CW domain binds to histone tail modifications found in different protein families involved in epigenetic regulation and chromatin remodeling. CW domains recognize the methylation state of the fourth lysine on histone ...
    • A bio-economic analysis of harvest control rules for the Northeast Arctic cod fishery 

      Eikeset, Anne Marie; Richter, Andries Peter; Dankel, Dorothy Jane; Dunlop, Erin; Heino, Mikko Petteri; Dieckmann, Ulf; Stenseth, Nils Christian (Peer reviewed; Journal article, 2013-05)
      Harvest control rules (HCRs) have been implemented for many fisheries worldwide. However, in most instances, those HCRs are not based on the explicit feedbacks between stock properties and economic considerations. This ...
    • The bio-economic effects of artificial reefs: mixed evidence from Shandong, China 

      Sun, Peng; Liu, Xiaozi; Tang, Yangli; Cheng, Wenzhi; Sun, Runlong; Wang, Xinxin; Wan, Rong; Heino, Mikko Petteri (Peer reviewed; Journal article, 2017-10)
      Artificial reefs are used to protect coastal habitats and rebuild fisheries. This engineering approach to fisheries management has gained popularity in many coastal areas, including China. In Shandong province alone, over ...
    • The bio.tools registry of software tools and data resources for the life sciences 

      Ison, Jon; Ienasescu, Hans-Ioan; Chmura, Piotr; Rydza, Emil; Ménager, Hervé; Kalaš, Matúš; Schwämmle, Veit; Grüning, Björn A.; Beard, Niall; Lopez, Rodrigo; Duvaud, Severine; Stockinger, Heinz; Persson, Bengt; Svobodová Vařeková, Radka; Raček, Tomáš; Vondrášek, Jiří; Peterson, Hedi; Salumets, Ahto; Jonassen, Inge; et al., +18 authors (total 37) (Peer reviewed; Journal article, 2019-08-12)
      Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise ...
    • Bioaccumulation of mercury and transcriptional responses in tusk (Brosme brosme), a deep-water fish from a Norwegian fjord 

      Olsvik, Pål Asgeir; Mahjour Azad, Atabak; Yadetie, Fekadu (Journal article; Peer reviewed, 2021)
      High concentrations of mercury (Hg) have been documented in deep-water fish species from some Norwegian fjords. In this study, tusk (Brosme brosme) was sampled from four locations in the innermost parts of Sognefjorden in ...
    • Bioactive Metabolites of Marine Origin Have Unusual Effects on Model Membrane Systems 

      Jakubec, Martin; Totland, Christian; Rise, Frode; Chamgordani, Elahe Jafari; Paulsen, Britt; Maes, Louis; Matheeussen, An; Gundersen, Lise-Lotte; Halskau, Øyvind (Journal article; Peer reviewed, 2020)
      Marine sponges and soft corals have yielded novel compounds with antineoplastic and antimicrobial activities. Their mechanisms of action are poorly understood, and in most cases, little relevant experimental evidence is ...
    • Bioactivity of Biosilica Obtained From North Atlantic Deep-Sea Sponges 

      Dudik, Olesia; Amorim, Sara; Xavier, Joana R.; Rapp, Hans Tore; Silva, Tiago H.; Pires, Ricardo A.; Reis, Rui L. (Journal article; Peer reviewed, 2021-05-17)
      Demosponges are a well-known source of a plethora of bioactive compounds. In particular, they are able to form a skeleton by direct deposition of silica in a process catalyzed by silicatein. Herein, we isolated biosilicas ...
    • Bioavailability of Macro and Micronutrients Across Global Topsoils: Main Drivers and Global Change Impacts 

      Ochoa-Hueso, Raúl; Delgado-Baquerizo, Manuel; Risch, Anita C.; Ashton, Louise; Augustine, David; Bélanger, Nicolas; Bridgham, Scott; Britton, Andrea J.; Bruckman, Viktor J.; Camarero, J. Julio; Cornelissen, Gerard; Crawford, John A.; Dijkstra, Feike A.; Diochon, Amanda; Earl, Stevan; Edgerley, James; Epstein, Howard; Felton, Andrew; Fortier, Julien; Gagnon, Daniel; Greer, Ken; Griffiths, Hannah M.; Halde, Caroline; Hanslin, Hans Martin; Harris, Lorna I.; Hartsock, Jeremy A.; Hendrickson, Paul; Hovstad, Knut Anders; Hu, Jia; Jani, Arun D.; Kent, Kelcy; Kerdraon-Byrne, Deirdre; Khalsa, Sat Darshan S.; Lai, Derrick Y. F.; Lambert, France; LaMontagne, Jalene M.; Lavergne, Stéphanie; Lawrence, Beth A.; Littke, Kim; Leeper, Abigail C.; Licht, Mark A.; Liebig, Mark A.; Lynn, Joshua; Maclean, Janet E.; Martinsen, Vegard; McDaniel, Marshall D.; McIntosh, Anne C. S.; Miesel, Jessica R.; Miller, Jim; Mulvaney, Michael J.; Moreno, Gerardo; Newstead, Laura; Pakeman, Robin J.; Pergl, Jan; Pinno, Bradley D.; Piñeiro, Juan; Quigley, Kathleen; Radtke, Troy M.; Reed, Paul; Rolo, Víctor; Rudgers, Jennifer; Rutherford, P. Michael; Sayer, Emma J.; Serrano-Grijalva, Lilia; Strack, Maria; Sukdeo, Nicole; Taylor, Andy F. S.; Truax, Benoit; Tsuji, Leonard J. S.; van Gestel, Natasja; Vaness, Brenda M.; Van Sundert, Kevin; Vítková, Michaela; Weigel, Robert; Wilton, Meaghan J.; Yano, Yuriko; Teen, Ewing; Bremer, Eric (Journal article; Peer reviewed, 2023)
      Understanding the chemical composition of our planet's crust was one of the biggest questions of the 20th century. More than 100 years later, we are still far from understanding the global patterns in the bioavailability ...
    • bioCEED Survey 2015 

      Hole, Torstein Nielsen; Jeno, Lucas Matias; Holtermann, Kristin; Raaheim, Arild; Velle, Gaute; Simonelli, Anne Laure; Vandvik, Vigdis (Research report, 2016-04)
      The bioCEED Survey 2015 is a baseline study of major tertiary-level biology education in Norway. The survey addresses themes such as learning in practice, transferable skills, motivation, laboratory and field learning, ...
    • Biochemical and cellular analysis of Ogden syndrome reveals downstream Nt-acetylation defects 

      Myklebust, Line Merethe; Van Damme, Petra; Støve, Svein Isungset; Dörfel, Max J; Abboud, Angèle; Kalvik, Thomas Vikestad; Grauffel, Cédric; Jonckheere, Veronique; Wu, Yiyang; Swensen, Jeffrey; Kaasa, Hanna; Liszczak, Glen; Marmorstein, Ronen; Reuter, Nathalie; Lyon, Gholson J; Gevaert, Kris; Arnesen, Thomas (Peer reviewed; Journal article, 2014-12-03)
      The X-linked lethal Ogden syndrome was the first reported human genetic disorder associated with a mutation in an N-terminal acetyltransferase (NAT) gene. The affected males harbor an Ser37Pro (S37P) mutation in the gene ...
    • Biochemical and virological analysis of the 18-residue C-terminal tail of HIV-1 integrase 

      Dar, Mohd J.; Monel, Blandine; Krishnan, Lavanya; Shun, Ming-Chieh; Di Nunzio, Francesca; Helland, Dag Emil; Engelman, Alan (Peer reviewed; Journal article, 2009-10-19)
      Background The 18 residue tail abutting the SH3 fold that comprises the heart of the C-terminal domain is the only part of HIV-1 integrase yet to be visualized by structural biology. To ascertain the role of the tail region ...
    • Biodiversity and spatial ecology of arctic sponge grounds in the Nordic Seas 

      Meyer, Heidi Kristina (Doctoral thesis, 2022-06-17)
      Sponge grounds are biogenic habitats formed by large structure-forming sponges in the deep-sea. They are biodiversity hotspots because they provide associated fauna a place of refuge, additional substratum, foraging areas, ...