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Genetic structure of Sufflogobius bibarbatus in the Benguela upwelling ecosystem using microsatellite markers
(Journal article; Peer reviewed, 2020)The bearded goby Sufflogobius bibarbatus is an abundant endemic small fish species on the continental shelf of the northern Benguela. The goby habitat is characterised by generally low bottom oxygen concentrations that ... -
Genetic variation of Piscine orthoreovirus and the presence of HSMI in farmed Atlantic salmon from Arctic Norway
(Master thesis, 2021-06-22)Piscine orthoreovirus-1 (PRV1) is ubiquitous throughout the world and can cause heart- and skeletal muscle inflammation (HSMI) in farmed Atlantic salmon (Salmo salar). HSMI was first diagnosed in Norway in 1999. The virus ... -
Genetically modified plants as fish feed ingredients. Roundup Ready® soy, MON810 maize, Atlantic salmon, zebrafish
(Doctoral thesis, 2009-09-25)Commonly used plant ingredients in salmon feed such as soybeans and maize are increasingly grown as genetically modified (GM) varieties. The question arises whether these are equally nutritious and safe for the fish as ... -
Genetically similar temperate phages form coalitions with their shared host that lead to niche-specific fitness effects.
(Journal article; Peer reviewed, 2020-04-02)Temperate phages engage in long-term associations with their hosts that may lead to mutually beneficial interactions, of which the full extent is presently unknown. Here, we describe an environmentally relevant model system ... -
Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation
(Peer reviewed; Journal article, 2012-07-26)Background: Biogeochemical elemental cycling is driven by primary production of biomass via phototrophic phytoplankton growth, with 40% of marine productivity being assigned to diatoms. Phytoplankton growth is widely limited ... -
Genome wide analysis reveals genetic divergence between Goldsinny wrasse populations
(Journal article; Peer reviewed, 2020)Background Marine fish populations are often characterized by high levels of gene flow and correspondingly low genetic divergence. This presents a challenge to define management units. Goldsinny wrasse (Ctenolabrus ... -
Genome- and transcriptomederived microsatellite loci in lumpfsh Cyclopterus lumpus: molecular tools for aquaculture, conservation and fsheries management
(Journal article; Peer reviewed, 2020)The lumpfish Cyclopterus lumpus is commercially exploited in numerous areas of its range in the North Atlantic Ocean, and is important in salmonid aquaculture as a biological agent for controlling sea lice. Despite the ... -
Genome-wide analysis of Atlantic salmon (Salmo salar) mucin genes and their role as biomarkers
(Peer reviewed; Journal article, 2017-10-08)The aim of this study was to identify potential mucin genes in the Atlantic salmon genome and evaluate tissue-specific distribution and transcriptional regulation in response to aquaculture- relevant stress conditions in ... -
Genome-wide analysis of the sox family in the calcareous sponge Sycon ciliatum: multiple genes with unique expression patterns
(Peer reviewed; Journal article, 2012-06-23)Background: Sox genes are HMG-domain containing transcription factors with important roles in developmental processes in animals; many of them appear to have conserved functions among eumetazoans. Demosponges have fewer ... -
Genome-wide DNA methylation profiling of non-small cell lung carcinomas
(Peer reviewed; Journal article, 2012-06-22)Background: Non-small cell lung carcinoma (NSCLC) is a complex malignancy that owing to its heterogeneity and poor prognosis poses many challenges to diagnosis, prognosis and patient treatment. DNA methylation is an important ... -
The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation
(Peer reviewed; Journal article, 2010)One of the complexes formed by the hematopoietic transcription factor Gata1 is a complex with the Ldb1 (LIM domain-binding protein 1) and Tal1 proteins. It is known to be important for the development and differentiation ... -
Genome-wide SNP analyses reveal population structure of Portunus pelagicus alongVietnam coastline
(Peer reviewed; Journal article, 2019-11-05)The blue swimming crab (Portunus pelagicus Linnaeus, 1758) is one of the commercially exploited crab fishery resources in Vietnam. This is the first study to provide a broad survey of genetic diversity, population structure ... -
Genomic Adaptations to an Endoparasitic Lifestyle in the Morphologically Atypical Crustacean Sacculina carcini (Cirripedia: Rhizocephala)
(Journal article; Peer reviewed, 2022)The endoparasitic crustacean Sacculina carcini (Cirripedia: Rhizocephala) has a much simpler morphology than conventional filter-feeding barnacles, reflecting its parasitic lifestyle. To investigate the molecular basis of ... -
Genomic analysis of pasteurella atlantica provides insight on its virulence factors and phylogeny and highlights the potential of reverse vaccinology in aquaculture
(Journal article; Peer reviewed, 2021)Pasteurellosis in farmed lumpsuckers, Cyclopterus lumpus, has emerged as a serious disease in Norwegian aquaculture in recent years. Genomic characterization of the causative agent is essential in understanding the biology ... -
Genomic analysis reveals neutral and adaptive patterns that challenge the current management regime for East Atlantic cod Gadus morhua L
(Journal article; Peer reviewed, 2020)Challenging long‐held perceptions of fish management units can help to protect vulnerable stocks. When a fishery consisting of multiple genetic stocks is managed as a single unit, overexploitation and depletion of minor ... -
Genomic characterization and phylogenetic position of two new species in Rhabdoviridae infecting the parasitic copepod, salmon louse (Lepeophtheirus salmonis)
(Peer reviewed; Journal article, 2014-11-17)Several new viruses have emerged during farming of salmonids in the North Atlantic causing large losses to the industry. Still the blood feeding copepod parasite, Lepeophtheirus salmonis, remains the major challenge for ... -
Genomic evidence of recent European introgression into North American farmed and wild Atlantic salmon
(Journal article; Peer reviewed, 2022)Gene flow between wild and domestic populations has been repeatedly demonstrated across a diverse range of taxa. Ultimately, the genetic impacts of gene flow from domestic into wild populations depend both on the degree ... -
Genomic Insights into Methanotrophy: The Complete Genome Sequence of Methylococcus capsulatus (Bath)
(Peer reviewed; Journal article, 2004-09-21)Methanotrophs are ubiquitous bacteria that can use the greenhouse gas methane as a sole carbon and energy source for growth, thus playing major roles in global carbon cycles, and in particular, substantially reducing ... -
Genomic Resources for Sea Lice: Analysis of ESTs and Mitochondrial Genomes
(Peer reviewed; Journal article, 2011-07-12)Sea lice are common parasites of both farmed and wild salmon. Salmon farming constitutes an important economic market in North America, South America, and Northern Europe. Infections with sea lice can result in significant ... -
Genomic Signatures of Local Adaptation under High Gene Flow in Lumpfish—Implications for Broodstock Provenance Sourcing and Larval Production
(Journal article; Peer reviewed, 2023-09-26)Aquaculture of the lumpfish (Cyclopterus lumpus L.) has become a large, lucrative industry owing to the escalating demand for “cleaner fish” to minimise sea lice infestations in Atlantic salmon mariculture farms. We used ...