Blar i Department of Biological Sciences på tittel
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Genome-wide analysis of Atlantic salmon (Salmo salar) mucin genes and their role as biomarkers
(Peer reviewed; Journal article, 2017-10-08)The aim of this study was to identify potential mucin genes in the Atlantic salmon genome and evaluate tissue-specific distribution and transcriptional regulation in response to aquaculture- relevant stress conditions in ... -
Genome-wide analysis of the sox family in the calcareous sponge Sycon ciliatum: multiple genes with unique expression patterns
(Peer reviewed; Journal article, 2012-06-23)Background: Sox genes are HMG-domain containing transcription factors with important roles in developmental processes in animals; many of them appear to have conserved functions among eumetazoans. Demosponges have fewer ... -
Genome-wide DNA methylation profiling of non-small cell lung carcinomas
(Peer reviewed; Journal article, 2012-06-22)Background: Non-small cell lung carcinoma (NSCLC) is a complex malignancy that owing to its heterogeneity and poor prognosis poses many challenges to diagnosis, prognosis and patient treatment. DNA methylation is an important ... -
The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation
(Peer reviewed; Journal article, 2010)One of the complexes formed by the hematopoietic transcription factor Gata1 is a complex with the Ldb1 (LIM domain-binding protein 1) and Tal1 proteins. It is known to be important for the development and differentiation ... -
Genome-wide SNP analyses reveal population structure of Portunus pelagicus alongVietnam coastline
(Peer reviewed; Journal article, 2019-11-05)The blue swimming crab (Portunus pelagicus Linnaeus, 1758) is one of the commercially exploited crab fishery resources in Vietnam. This is the first study to provide a broad survey of genetic diversity, population structure ... -
Genomic Adaptations to an Endoparasitic Lifestyle in the Morphologically Atypical Crustacean Sacculina carcini (Cirripedia: Rhizocephala)
(Journal article; Peer reviewed, 2022)The endoparasitic crustacean Sacculina carcini (Cirripedia: Rhizocephala) has a much simpler morphology than conventional filter-feeding barnacles, reflecting its parasitic lifestyle. To investigate the molecular basis of ... -
Genomic analysis of pasteurella atlantica provides insight on its virulence factors and phylogeny and highlights the potential of reverse vaccinology in aquaculture
(Journal article; Peer reviewed, 2021)Pasteurellosis in farmed lumpsuckers, Cyclopterus lumpus, has emerged as a serious disease in Norwegian aquaculture in recent years. Genomic characterization of the causative agent is essential in understanding the biology ... -
Genomic analysis reveals neutral and adaptive patterns that challenge the current management regime for East Atlantic cod Gadus morhua L
(Journal article; Peer reviewed, 2020)Challenging long‐held perceptions of fish management units can help to protect vulnerable stocks. When a fishery consisting of multiple genetic stocks is managed as a single unit, overexploitation and depletion of minor ... -
Genomic characterization and phylogenetic position of two new species in Rhabdoviridae infecting the parasitic copepod, salmon louse (Lepeophtheirus salmonis)
(Peer reviewed; Journal article, 2014-11-17)Several new viruses have emerged during farming of salmonids in the North Atlantic causing large losses to the industry. Still the blood feeding copepod parasite, Lepeophtheirus salmonis, remains the major challenge for ... -
Genomic evidence of recent European introgression into North American farmed and wild Atlantic salmon
(Journal article; Peer reviewed, 2022)Gene flow between wild and domestic populations has been repeatedly demonstrated across a diverse range of taxa. Ultimately, the genetic impacts of gene flow from domestic into wild populations depend both on the degree ... -
Genomic Insights into Methanotrophy: The Complete Genome Sequence of Methylococcus capsulatus (Bath)
(Peer reviewed; Journal article, 2004-09-21)Methanotrophs are ubiquitous bacteria that can use the greenhouse gas methane as a sole carbon and energy source for growth, thus playing major roles in global carbon cycles, and in particular, substantially reducing ... -
Genomic Resources for Sea Lice: Analysis of ESTs and Mitochondrial Genomes
(Peer reviewed; Journal article, 2011-07-12)Sea lice are common parasites of both farmed and wild salmon. Salmon farming constitutes an important economic market in North America, South America, and Northern Europe. Infections with sea lice can result in significant ... -
Genomic Signatures of Local Adaptation under High Gene Flow in Lumpfish—Implications for Broodstock Provenance Sourcing and Larval Production
(Journal article; Peer reviewed, 2023-09-26)Aquaculture of the lumpfish (Cyclopterus lumpus L.) has become a large, lucrative industry owing to the escalating demand for “cleaner fish” to minimise sea lice infestations in Atlantic salmon mariculture farms. We used ... -
Genotyping of Tenacibaculum maritimum isolates from farmed Atlantic salmon in Western Canada
(Peer reviewed; Journal article, 2018-01)Mouthrot infections (bacterial stomatitis) have a significant impact on the Atlantic salmon aquaculture industry in Western Canada due to economic losses and fish welfare. Bacteria isolated from lesions in the field have ... -
Genotyping tool for salmonid gill pox virus (SGPV) obtained from farmed and wild Atlantic salmon (Salmo salar)
(Journal article; Peer reviewed, 2023)Poxviruses are common viruses found in vertebrate species. In 2006, the first poxvirus associated with salmon, salmonid gill poxvirus (SGPV), was identified during an outbreak of gill disease at a smolt production site in ... -
Geochemical transition zone powering microbial growth in subsurface sediments
(Journal article; Peer reviewed, 2020)No other environment hosts as many microbial cells as the marine sedimentary biosphere. While the majority of these cells are expected to be alive, they are speculated to be persisting in a state of maintenance without net ... -
Geographic distribution, abundance, diet, and body size of invasive pink salmon (Oncorhynchus gorbuscha) in the Norwegian and Barents Seas, and in Norwegian rivers
(Journal article; Peer reviewed, 2022)We report for the first time the geographic distribution, abundance, diet, and body size of invasive pink salmon (Oncorhynchus gorbuscha) in the Norwegian and Barents Seas and Norwegian coast and rivers. We found that pink ... -
Geographic variation in gene flow from a genetically distinct migratory ecotype drives population genetic structure of coastal Atlantic cod (Gadus morhua L.)
(Journal article; Peer reviewed, 2022)Identifying how physical and biotic factors shape genetic connectivity among populations in time and space is essential to our understanding of the evolutionary trajectory as well as the management of marine species. ... -
Geographical and management related factors affecting lambs of outwintered sheep along the west coast of Norway. A baseline study in the research project feral sheep in coastal heats - developing a sustainable local industry in vulnerable cultural landscapes
(Master thesis, 2008)The Ancient Norse breed of outwintered sheep (ANBOS/Feral sheep) are the traditional sheep of Norwegian coastal heathlands, an open semi-natural landscape now threatened by regrowth due to cessation of management. One of ... -
Geomicrobial characterisation of a 60 m long permafrost core, taken over a future CO2 storage site at Svalbard
(Master thesis, 2014-09-11)In connection with a planned CO2 storage pilot project in the Arctic, a 60 m long permafrost core was drilled in Adventdalen, Svalbard, representing the poorly studied deep permafrost ecosystems. The on-shore drilling was ...