Browsing Department of Biological Sciences by Document Types "Journal article"

Now showing items 1-20 of 1812

    • An 18S V4 rDNA metabarcoding dataset of protist diversity in the Atlantic inflow to the Arctic Ocean, through the year and down to 1000 m depth 

      Egge, Elianne Dunthorn; Elferink, Stephanie; Vaulot, Daniel; John, Uwe; Bratbak, Gunnar; Larsen, Aud; Edvardsen, Bente (Journal article, 2021)
      Arctic marine protist communities have been understudied due to challenging sampling conditions, in particular during winter and in deep waters. The aim of this study was to improve our knowledge on Arctic protist diversity ...

    • 1H NMR metabolic profiling of cod (Gadus morhua) larvae: potential effects of temperature and diet composition during early developmental stages 

      Chauton, Matilde Skogen; Galloway, Trine Falck; Kjørsvik, Elin; Størseth, Trond Røvik; Puvanendran, Velmurugu; van der Meeren, Terje; Karlsen, Ørjan; Rønnestad, Ivar; Hamre, Kristin (Peer reviewed; Journal article, 2015)
      Marine aquaculture offers a great source of protein for the increasing human population, and farming of, for example, Atlantic salmon is a global industry. Atlantic cod farming however, is an example of a promising industry ...

    • The 2021 FASEB science research conference on NAD metabolism and signaling 

      Gorbunova, Vera; Buschbeck, Marcus; Cambronne, Xiaolu A.; Chellappa, Karthikeyani; Corda, Daniela; Du, Juan; Freichel, Marc; Gigas, Jonathan; Green, Alexander E.; Gu, Feng; Guberovic, Iva; Jayabalan, Aravinthkumar; Khansahib, Imrankhan; Mukherjee, Sarmistha; Seluanov, Andrei; Simon, Matthew A.; Sverkeli, Lars Jansen; Kory, Nora; Levine, Daniel C.; Matic, Ivan; Nikiforov, Andrey; Rack, Johannes G.M.; Imai, Shin-Ichiro; Sinclair, David A.; Toiber, Debra; Zhao, Yongjuan; Mostoslavsky, Raul; Kraus, Lee; Guse, Andreas H. (Journal article; Peer reviewed, 2021)

    • A 24,000-year ancient DNA and pollen record from the Polar Urals reveals temporal dynamics of arctic and boreal plant communities 

      Clarke, Charlotte L.; Alsos, Inger Greve; Edwards, Mary E.; Paus, Aage; Gielly, Ludovic; Haflidason, Haflidi; Mangerud, Jan; Regnéll, Carl; Hughes, Paul D.M.; Svendsen, John-Inge; Bjune, Anne Elisabeth (Journal article; Peer reviewed, 2020)
      A 24,000-year record of plant community dynamics, based on pollen and ancient DNA from the sediments (sedaDNA) of Lake Bolshoye Shchuchye in the Polar Ural Mountains, provides detailed information on the flora of the Last ...

    • 30,000 years of landscape and vegetation dynamics in a mid-elevation Andean valley 

      McMichael, Chrystal; Witteveen, Nina; Scholz, Simon; Zwier, Maaike; Prins, Maarten; Lougheed, Bryan C.; Mothes, Patricia; Gosling, William D. (Journal article; Peer reviewed, 2021)
      The mid-elevation settings of the Andes are important biodiversity hotspots, yet little is known of their long-term ecology or environmental change. Here, we assess 30,000 years of landscape and vegetation dynamics on an ...

    • The 474-Kilobase-Pair Complete Genome Sequence of CeV-01B, a Virus Infecting Haptolina (Chrysochromulina) ericina(Prymnesiophyceae) 

      Gallot-lavallée, Lucie; Pagarete, António; Legendre, Matthieu; Santini, Sebastien; Sandaa, Ruth-Anne; Himmelbauer, Heinz; Ogata, Hiroyuki; Bratbak, Gunnar; Claverie, Jean-Michel (Peer reviewed; Journal article, 2015-12-03)
      We report the complete genome sequence of CeV-01B, a large double-stranded DNA virus infecting the unicellular marine phytoplankton Haptolina (formerly Chrysochromulina) ericina. CeV-01B and its closest relative Phaeocystis ...

    • 60 years of scientific deep drilling in Colombia: The north Andean guide to the Quaternary 

      Hooghiemstra, Henry; Pérez, Gustavo Sarmiento; Torres Torres, Vladimir; Berrío, Juan-Carlos; Lourens, Lucas; Flantua, Suzette (Journal article; Peer reviewed, 2022)
      We sketch the initial history of collecting deep cores in terrestrial and marine sedimentary basins and ice cores to study environmental and climate change. Subsequently, we focus on the development of long records from ...

    • Abrupt change in tropical Pacific climate mean state during the Little Ice Age 

      Prohaska, Ana; Seddon, Alistair William Robin; Meese, Bernd; Willis, Katherine Jane; Chiang, John C. H.; Sachse, Dirk (Journal article; Peer reviewed, 2023)
      The mean state of the tropical Pacific ocean-atmosphere climate, in particular its east-west asymmetry, has profound consequences for regional climates and for the El Niño/Southern Oscillation variability. Here we present ...

    • Acacia trees on the cultural landscapes of the Red Sea Hills 

      Hobbs, Joseph J.; Krzywinski, Knut; Andersen, Gidske Leknæs; Talib, Mohamed; Pierce, Richard H.; Saadallah, Ahmed Ebaid Mohamed (Peer reviewed; Journal article, 2014-07-18)
      This paper examines interactions between five pastoral nomadic culture groups of the Egyptian and Sudanese Red Sea Hills and the acacia trees Acacia tortilis (Forssk.) Hayne subsp. tortilis and subsp. raddiana growing in ...

    • Accelerated Sarcopenia Phenotype in the DJ-1/Park7-Knockout Zebrafish 

      Rostad, Kristine Ovidia; Trognitz, Tobias; Frøyset, Ann Kristin; Bifulco, Ersilia; Fladmark, Kari Espolin (Journal article; Peer reviewed, 2024)
      Age-dependent loss of muscle mass and function is associated with oxidative stress. DJ-1/Park7 acts as an antioxidant through multiple signalling pathways. DJ-1-knockout zebrafish show a decline in swimming performance and ...

    • Accumulation and distribution of microplastics in coastal sediments from the inner Oslofjord, Norway 

      Bronzo, Laura; Lusher, Amy L.; Schøyen, Merete; Morigi, Caterina (Journal article; Peer reviewed, 2021)
      Microplastic presence in benthic marine systems is a widely discussed topic. The influence of the natural matrix on microplastic distribution within the sedimentary matrix is often overlooked. Marine sediments from the ...

    • Acoustic Delicing of Atlantic Salmon (Salmo salar): Fish Welfare and Salmon Lice (Lepeophtheirus salmonis) Dynamics 

      Hjelle, Bibbi Maria Kallay; Imsland, Albert; Vigo, Pablo Balseiro; Handeland, Sigurd Olav (Journal article; Peer reviewed, 2022)
      Acoustic lice treatment (AcuLice) is a newly developed system, which uses a composite acoustic sound image with low-frequency sound to remove salmon lice (Lepeophtheirus salmonis) from Atlantic salmon (Salmo salar). This ...

    • Acoustic telemetry predation sensors reveal the tribulations of Atlantic salmon (Salmo salar) smolts migrating through lakes 

      Hanssen, Erlend Mjelde; Vollset, Knut Wiik; Salvanes, Anne Gro Vea; Barlaup, Bjørn; Whoriskey, Kim; Isaksen, Trond Einar; Normann, Eirik Straume; Hulbak, Magnus Andre; Lennox, Robert (Journal article; Peer reviewed, 2021)
      Smolt migration through lakes is hazardous, as the predation pressure can be extreme and the hydrology a great contrast to that of a riverine area. However, the mechanisms yielding these challenges have been scarcely ...

    • Actions on sustainable food production and consumption for the post-2020 global biodiversity framework 

      Delabre, Izabela; Rodriguez, Lily O.; Smallwood, Joanna Miller; Scharlemann, Jörn P.W.; Alcamo, Joseph; Antonarakis, Alexander S.; Rowhani, Pedram; Hazell, Richard J.; Aksnes, Dag Lorents; Balvanera, Patricia; Lundquist, Carolyn J.; Gresham, Charlotte; Alexander, Anthony E.; Stenseth, Nils Christian (Journal article; Peer reviewed, 2021)
      Current food production and consumption trends are inconsistent with the Convention on Biological Diversity’s 2050 vision of living in harmony with nature. Here, we examine how, and under what conditions, the post-2020 ...

    • Activation mechanism and activity of globupain, a thermostable C11 protease from the Arctic Mid-Ocean Ridge hydrothermal system 

      Røyseth, Victoria; M. Hurysz, Brianna; Kaczorowska, Anna-Karina; Dorawa, Sebastian; Fedøy, Anita-Elin; Arsin, Hasan; Sá M. Serafim, Mateus; A. Myers, Samuel; Werbowy, Olesia; Kaczorowski, Tadeusz; Stokke, Runar; O'Donoghue, Anthony J.; Steen, Ida Helene (Journal article; Peer reviewed, 2023)
      Deep-sea hydrothermal vents offer unique habitats for heat tolerant enzymes with potential new enzymatic properties. Here, we present the novel C11 protease globupain, which was prospected from a metagenome-assembled genome ...

    • Acute effects of gas supersaturation on Atlantic salmon smolt in two Norwegian rivers 

      Stenberg, Sondre Kvalsvik; Velle, Gaute; Pulg, Ulrich; Skoglund, Helge (Journal article; Peer reviewed, 2020)
      Total dissolved gas (TDG) supersaturation downstream of hydropower plants may cause gas bubble disease (GBD) and harmful effects in fish. Little is known about tolerance levels of TDG supersaturation on Atlantic salmon ...

    • Acute warming tolerance (CTmax) in zebrafish (Danio rerio) appears unaffected by changes in water salinity 

      Åsheim, Eirik Ryvoll; Andreassen, Anna Haukedal; Morgan, Rachael Louise; Silvestre Manuel, Mireia; Jutfelt, Fredrik Walter Jonas (Journal article; Peer reviewed, 2024)
      Tolerance against acute warming is an essential trait that can determine how organisms cope during heat waves, yet the mechanisms underlying it remain elusive. Water salinity has previously been suggested to modulate warming ...

    • Adaptive and plastic variation in growth and maturation of the cutlassfish Trichiurus japonicus in the subtropical Pacific Ocean 

      Wang, Hui-Yu; Heino, Mikko Petteri (Peer reviewed; Journal article, 2018)

    • Adaptive digital tissue deconvolution 

      Görtler, Franziska Stilla Maria; Mensching-Buhr, Malte; Skaar, Ørjan Løseth; Schrod, Stefan; Sterr, Thomas; Schäfer, Andreas; Beißbarth, Tim; Joshi, Anagha; Zacharias, Helena U.; Grellscheid, Sushma Nagaraja; Altenbuchinger, Michael (Journal article; Peer reviewed, 2024)
      Motivation The inference of cellular compositions from bulk and spatial transcriptomics data increasingly complements data analyses. Multiple computational approaches were suggested and recently, machine learning ...

    • Adaptive evolution of viruses infecting marine microalgae (haptophytes), from acute infections to stable coexistence 

      Sandaa, Ruth-Anne; Saltvedt, Marius Rydningen; Dahle, Håkon; Wang, Haina; Våge, Selina; Blanc-Mathieu, Romain; Steen, Ida Helene; Grimsley, Nigel; Edvardsen, Bente; Ogata, Hiroyuki; Lawrence, Janice (Journal article; Peer reviewed, 2022)
      Collectively known as phytoplankton, photosynthetic microbes form the base of the marine food web, and account for up to half of the primary production on Earth. Haptophytes are key components of this phytoplankton community, ...