Blar i University of Bergen Library på forfatter "Mitternacht, Simon"
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FreeSASA: An open source C library for solvent accessible surface area calculations
Mitternacht, Simon (Peer reviewed; Journal article, 2016-02-29)Calculating solvent accessible surface areas (SASA) is a run-of-the-mill calculation in structural biology. Although there are many programs available for this calculation, there are no free-standing, open-source tools ... -
Mechanical resistance in unstructured proteins
Jónsson, Sigurður Ægir; Mitternacht, Simon; Irbäck, Anders (Peer reviewed; Journal article, 2013-06-18)Single-molecule pulling experiments on unstructured proteins linked to neurodegenerative diseases have measured rupture forces comparable to those for stable folded proteins. To investigate the structural mechanisms of ... -
SPACER: server for predicting allosteric communication and effects of regulation
Goncearenco, Alexander; Mitternacht, Simon; Yong, Taipang; Eisenhaber, Birgit; Eisenhaber, Frank; Berezovsky, Igor (Peer reviewed; Journal article, 2013-06-03)The SPACER server provides an interactive framework for exploring allosteric communication in proteins with different sizes, degrees of oligomerization and function. SPACER uses recently developed theoretical concepts based ...