Blar i Bergen Open Research Archive på tidsskrift "Genome Biology"
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The bio.tools registry of software tools and data resources for the life sciences
(Peer reviewed; Journal article, 2019-08-12)Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise ... -
Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation
(Peer reviewed; Journal article, 2012-07-26)Background: Biogeochemical elemental cycling is driven by primary production of biomass via phototrophic phytoplankton growth, with 40% of marine productivity being assigned to diatoms. Phytoplankton growth is widely limited ... -
Massively parallel sequencing identifies a previously unrecognized X-linked disorder resulting in lethality in male infants owing to amino-terminal acetyltransferase deficiency
(Conference object; Peer reviewed, 2011-09-19) -
Retroviral enhancer detection insertions in zebrafish combined with comparative genomics reveal genomic regulatory blocks - a fundamental feature of vertebrate genomes
(Journal article; Peer reviewed, 2007-10-31)A large-scale enhancer detection screen was performed in the zebrafish using a retroviral vector carrying a basal promoter and a fluorescent protein reporter cassette. Analysis of insertional hotspots uncovered areas around ... -
Synorth: exploring the evolution of synteny and long-range regulatory interactions in vertebrate genomes
(Journal article; Peer reviewed, 2009-08-21)Genomic regulatory blocks are chromosomal regions spanned by long clusters of highly conserved noncoding elements devoted to long-range regulation of developmental genes, often immobilizing other, unrelated genes into ... -
Transposon mediated transgenesis in a marine invertebrate chordate: Ciona intestinalis
(Journal article; Peer reviewed, 2007-10-31)Achievement of transposon mediated germline transgenesis in a basal chordate, Ciona intestinalis, is discussed. A Tc1/mariner superfamily transposon, Minos, has excision and transposition activities in Ciona. Minos enables ...