• CellSegm - a MATLAB toolbox for high-throughput 3D cell segmentation 

      Hodneland, Erlend; Kögel, Tanja; Frei, Dominik M.; Gerdes, Hans-Hermann; Lundervold, Arvid (Peer reviewed; Journal article, 2013-08-09)
      The application of fluorescence microscopy in cell biology often generates a huge amount of imaging data. Automated whole cell segmentation of such data enables the detection and analysis of individual cells, where a manual ...
    • Co-occurrence of contaminants in marine fish from the North East Atlantic Ocean: Implications for human risk assessment 

      Ho, Quang Tri; Bank, Michael; Mahjour Azad, Atabak; Nilsen, Bente Merete; Frantzen, Sylvia; Boitsov, Stepan; Måge, Amund; Kögel, Tanja; Sanden, Monica; Frøyland, Livar; Hannisdal, Rita; Hove, Helge Torbjørn; Lundebye, Anne-Katrine; Nøstbakken, Ole Jakob; Madsen, Lise (Journal article; Peer reviewed, 2021)
      Marine fish from the North East Atlantic Ocean (NEAO) are nutrient rich and considered a valuable economic resource. However, marine fish are also a major dietary source of several contaminants, including persistent organic ...
    • Moving forward in microplastic research: A Norwegian perspective 

      Lusher, Amy; Hurley, Rachel; Arp, Hans Peter H; Booth, Andy; Bråte, Inger Lise Nerland; Gabrielsen, Geir W.; Gomiero, Alessio; Gomes, Tania; Grøsvik, Bjørn Einar; Green, Norman; Haave, Marte; Hallanger, Ingeborg G.; Halsband, Claudia; Herzke, Dorte; Joner, Erik J; Kögel, Tanja; Rakkestad, Kirsten; Ranneklev, Sissel Brit; Wagner, Martin; Olsen, Marianne (Journal article; Peer reviewed, 2021)
      Given the increasing attention on the occurrence of microplastics in the environment, and the potential envi-ronmental threats they pose, there is a need for researchers to move quickly from basic understanding to applied ...
    • Novel microscopy-based screening method reveals regulators of contact-dependent intercellular transfer 

      Frei, Dominik Michael; Hodneland, Erlend; Rios-Mondragon, Ivan; Burtey, Anne Pierrette; Neumann, B; Bulkescher, Jutta; Schölermann, Julia; Pepperkok, Rainer; Gerdes, Hans-Hermann; Kögel, Tanja (Peer reviewed; Journal article, 2015-08-14)
      Contact-dependent intercellular transfer (codeIT) of cellular constituents can have functional consequences for recipient cells, such as enhanced survival and drug resistance. Pathogenic viruses, prions and bacteria can ...
    • Promoting deep learning in a constructively aligned system approach in a course in biomedical nutrition physiology 

      Kögel, Tanja (UPED-skrift, Working paper, 2018)
      The discussed consists of several modules, teaching students the basic principles of biomedical nutrition physiology. This is achieved by a combination of background knowledge lecturing, critical reading of relevant ...
    • Roles of Myosin Va and Rab3D in Membrane Remodeling of Immature Secretory Granules 

      Kögel, Tanja; Gerdes, Hans-Hermann (Peer reviewed; Journal article, 2010-12-22)
      Neuroendocrine secretory granules (SGs) are formed at the trans-Golgi network (TGN) as immature intermediates. In PC12 cells, these immature SGs (ISGs) are transported within seconds to the cell cortex, where they move ...