• A chromosome-level assembly of the Atlantic herring genome-detection of a supergene and other signals of selection 

      Pettersson, Mats E.; Rochus, Christina M.; Han, Fan; Chen, Junfeng; Hill, Jason; Wallerman, Ola; Fan, Guangyi; Hong, Xiaoning; Xu, Qiwu; Zhang, He; Liu, Shanshan; Liu, Xin; Haggerty, Leanne; Hunt, Toby; Martin, Fergal J.; Flicek, Paul; Bunikis, Ignas; Folkvord, Arild; Andersson, Leif (Peer reviewed; Journal article, 2019)
      The Atlantic herring is a model species for exploring the genetic basis for ecological adaptation, due to its huge population size and extremely low genetic differentiation at selectively neutral loci. However, such studies ...
    • Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis 

      Nepal, Chirag; Hadzhiev, Yavor; Previti, A. Christopher; Haberle, Vanja; Li, Nan; Takahashi, Hazuki; Suzuki, Ana Maria; Sheng, Ying; Abdelhamid, Rehab; Anand, Santosh; Gehrig, Jochen; Akalin, Altuna; Kockx, Christel E.M.; van der Sloot, Antoine A.J.; van Ijcken, Wilfred F.J.; Armant, Olivier; Rastegar, Sepand; Watson, Craig; Strähle, Uwe; Stupka, Elia; Carninci, Piero; Lenhard, Boris; Müller, Ferenc (Peer reviewed; Journal article, 2013)
      Spatiotemporal control of gene expression is central to animal development. Core promoters represent a previously unanticipated regulatory level by interacting with cis-regulatory elements and transcription initiation in ...