• Order Reconfiguration Under Width Constraints 

      Arrighi, Emmanuel Jean Paul Pierre; Fernau, Henning; Oliveira, Mateus De Oliveira; Wolf, Petra (Journal article; Peer reviewed, 2021)
      In this work, we consider the following order reconfiguration problem: Given a graph G together with linear orders ω and ω' of the vertices of G, can one transform ω into ω' by a sequence of swaps of adjacent elements in ...
    • Order Reconfiguration under Width Constraints 

      Arrighi, Emmanuel Jean Paul Pierre; Fernau, Henning; De Oliveira Oliveira, Mateus; Wolf, Petra Henrike Karola (Journal article; Peer reviewed, 2023)
      In this work, we consider the following order reconfiguration problem: Given a graph G together with linear orders ω and ω′ of the vertices of G, can one transform ω into ω′ by a sequence of swaps of adjacent elements in ...
    • Order-Related Problems Parameterized by Width 

      Arrighi, Emmanuel (Doctoral thesis, 2022-05-25)
      In the main body of this thesis, we study two different order theoretic problems. The first problem, called Completion of an Ordering, asks to extend a given finite partial order to a complete linear order while respecting ...
    • ORFik: a comprehensive R toolkit for the analysis of translation 

      Tjeldnes, Håkon; Labun, Kornel; Torres Cleuren, Yamila Nicole; Chyzynska, Katarzyna; Swirski, Michal; Valen, Eivind Dale (Journal article; Peer reviewed, 2021)
      Background With the rapid growth in the use of high-throughput methods for characterizing translation and the continued expansion of multi-omics, there is a need for back-end functions and streamlined tools for processing, ...
    • Ouroboros-E: An efficient Lattice-based Key-Exchange Protocol 

      Deneuville, Jean-Christophe; Gaborit, Philippe; Guo, Qian; Johansson, Thomas (Peer reviewed; Journal article, 2018)
      The Bit Flipping algorithm is a hard decision decoding algorithm originally designed by Gallager in 1962 to decode Low Density Parity Check Codes (LDPC). It has recently proved to be much more versatile, for Moderate Parity ...
    • Output-Sensitive Filtering of Streaming Volume Data 

      Šoltészová, Veronika; Birkeland, Åsmund; Stoppel, Sergej; Viola, Ivan; Bruckner, Stefan (Peer reviewed; Journal article, 2016-02)
      Real-time volume data acquisition poses substantial challenges for the traditional visualization pipeline where data enhancement is typically seen as a pre-processing step. In the case of 4D ultrasound data, for instance, ...
    • Overlapping Community Detection using Cluster Editing with Vertex Splitting 

      Askeland, Gard (Master thesis, 2022-11-21)
      The problem Cluster Editing with Vertex Splitting models the task of overlapping community detection by yielding a cluster graph wherein a vertex of the input graph may be split so that it is present in several clusters. ...
    • P3 problem and Magnolia language: Specializing array computations for emerging architectures 

      Chetioui, Benjamin; Larnøy, Marius Kleppe; Järvi, Jaakko Timo Henrik; Haveraaen, Magne; Mullin, Lenore (Journal article; Peer reviewed, 2022)
      The problem of producing portable high-performance computing (HPC) software that is cheap to develop and maintain is called the P3 (performance, portability, productivity) problem. Good solutions to the P3 problem have ...
    • Packing arc-disjoint cycles in tournaments 

      Bessy, Stephane; Bougeret, Marin; Krithika, R; Sahu, Abhishek; Saurabh, Saket; Thiebaut, Jocelyn; Zehavi, Meirav (Journal article; Peer reviewed, 2019)
      A tournament is a directed graph in which there is a single arc between every pair of distinct vertices. Given a tournament T on n vertices, we explore the classical and parameterized complexity of the problems of determining ...
    • Packing cycles faster than Erdos-Posa 

      Lokshtanov, Daniel; Mouawad, Amer E.; Saurabh, Saket; Zehavi, Meirav (Journal article; Peer reviewed, 2019)
      The Cycle Packing problem asks whether a given undirected graph $G=(V,E)$ contains $k$ vertex-disjoint cycles. Since the publication of the classic Erdös--Pósa theorem in 1965, this problem received significant attention ...
    • Parallel algorithms for computing k-connectivity 

      Haakonsen, Joachim (Master thesis, 2017-05-05)
    • Parallel algorithms for matching under preference 

      Lerring, Håkon Heggernes (Master thesis, 2017-06-20)
    • Parallel Community Detection in Incremental Graphs 

      Tønnessen, Magnus (Master thesis, 2023-06-02)
      The problem of community detection in large, expanding real-world networks presents significant challenges due to the scale and complexity of these networks. Traditional algorithms struggle to provide optimal solutions or ...
    • Parallel Graph Algorithms for Combinatorial Scientific Computing 

      Patwary, Mostofa Ali (Doctoral thesis, 2011-08-26)
    • Parallel Matching and Clustering Algorithms on GPUs 

      Naim, Md. (Doctoral thesis, 2017-06-17)
    • Parameter optimisation for the improved modelling of industrial-scale gas explosions 

      Both, Anna-Lena (Doctoral thesis, 2019-06-17)
      This thesis presents work on improving the predictive capabilities of a numerical model by parameter optimisation. The numerical model is based on computational fluid dynamics (CFD) and predicts the consequences of ...
    • Parameterization Above a Multiplicative Guarantee 

      Fomin, Fedor; Golovach, Petr; Lokshtanov, Daniel; Panolan, Fahad; Saurabh, Saket; Zehavi, Meirav (Journal article; Peer reviewed, 2020)
      Parameterization above a guarantee is a successful paradigm in Parameterized Complexity. To the best of our knowledge, all fixed-parameter tractable problems in this paradigm share an additive form defined as follows. Given ...
    • Parameterized complexity classification of deletion to list matrix-partition for low-order matrices 

      Agrawal, Akanksha; Kolay, Sudeshna; Madathil, Jayakrishnan; Saurabh, Saket (Journal article; Peer reviewed, 2019)
      Given a symmetric l x l matrix M=(m_{i,j}) with entries in {0,1,*}, a graph G and a function L : V(G) - > 2^{[l]} (where [l] = {1,2,...,l}), a list M-partition of G with respect to L is a partition of V(G) into l parts, ...
    • Parameterized complexity of categorical clustering with size constraints 

      Fomin, Fedor; Golovach, Petr; Purohit, Nidhi (Journal article; Peer reviewed, 2023)
    • Parameterized complexity of conflict-free matchings and paths 

      Agrawal, Akanksha; Jain, Pallavi; Kanesh, Lawqueen; Saurabh, Saket (Journal article; Peer reviewed, 2019)
      An input to a conflict-free variant of a classical problem Gamma, called Conflict-Free Gamma, consists of an instance I of Gamma coupled with a graph H, called the conflict graph. A solution to Conflict-Free Gamma in (I,H) ...