BORA - UiB

Bergen Open Research Archive

Browsing Department of Informatics by Title

Bergen Open Research Archive

Browsing Department of Informatics by Title

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  • Budaghyan, Lilya; Carlet, Claude (Peer reviewed; Journal article, Springer, 2011-01-06)
    We observe that the CCZ-equivalence of bent vectorial functions over F2nFn2 (n even) reduces to their EA-equivalence. Then we show that in spite of this fact, CCZ-equivalence can be used for constructing bent functions ...
  • Balzer, Susanne Mignon; Malde, Ketil; Lanzén, Anders; Sharma, Animesh; Jonassen, Inge (Peer reviewed; Journal article, Oxford University Press, 2010)
    Motivation: The commercial launch of 454 pyrosequencing in 2005was a milestone in genome sequencing in terms of performance and cost. Throughout the three available releases, average read lengths have ...
  • Balzer, Susanne Mignon (Doctoral thesis, The University of Bergen, 2013-06-17)
    The introduction of this thesis provides background knowledge on the 454 sequencing technology and a detailed review of the most relevant sequencing artifacts. Chapter 1 puts the 454 sequencing technology into a historical ...
  • Sætre, Narve (Master thesis, The University of Bergen, 1999-12)
  • Rosbach, Alexander Hoem; Bagge, Anya Helene (Chapter, Akademika forlag, 2013)
    In this paper we report on an attempt to classify student problems and mistakes, and measuring the frequency of particular problems in a firstsemester programming course. We also propose a scheme for annotating student ...
  • Yang, Guang (Doctoral thesis, The University of Bergen, 2012-08-31)
    This dissertation elaborates on channel coding for reliable communication in passive RFID systems. RFID applications have been developed and used widely. Since a passive RFID tag has no power requirements, passive ...
  • Mitternacht, Simon; Berezovsky, Igor N. (Peer reviewed; Journal article, Public Library of Science, 2011-12-08)
    Conformational changes in allosteric regulation can to a large extent be described as motion along one or a few coherent degrees of freedom. The states involved are inherent to the protein, in the sense that they are ...
  • Abyaneh, Mohammad Reza Sohizadeh (Conference object, The author, 2012)
    Recently, a new privacy-preserving elliptic curve based grouping proof protocol with colluding tag prevention( CTP) has been proposed. The CTP protocol is claimed to be resistant against colluding tags attacks in which ...
  • Kalleberg, Karl Trygve; Visser, Eelco (Journal article, Elsevier, 2006-01)
    Properties such as logging, persistence, debugging, tracing, distribution, performance monitoring and exception handling occur in most programming paradigms and are normally very difficult or even impossible to modularizewith ...
  • Möller, Steffen; Afgan, Enis; Banck, Michael; Bonnal, Raoul J. P.; Booth, Timothy; Chilton, John; Cock, Peter J. A.; Gumbel, Markus; Harris, Nomi; Holland, Richard; Kalaš, Matúš; Kaján, László; Kibukawa, Eri; Powel, David R.; Prins, Pjotr; Quinn, Jacqueline; Sallou, Olivier; Strozzi, Francesco; Seemann, Torsten; Sloggett, Clare; Soiland-Reyes, Stian; Spooner, William; Steinbiss, Sascha; Tille, Andreas; Travis, Anthony J.; Guimera, Roman V.; Katayama, Toshiaki; Chapman, Brad A. (Journal article, BioMed Central, 2014-11-27)
    Background: Computational biology comprises a wide range of technologies and approaches. Multiple technologies can be combined to create more powerful workflows if the individuals contributing the data or providing tools ...
  • Sasák, Róbert (Master thesis, The University of Bergen, 2010-08-02)
    Many parametrized problems were decided to be FPT or W-hard. However, there is still thousands of problems and parameters for which we do not know yet whether are FPT or W-hard. In this thesis, we provide a tool for extending ...
  • Alfaki, Mohammed; Haugland, Dag (Chapter; Peer reviewed, Dagstuhl Publishing, 2011)
    The pooling problem is an important global optimization problem which is encountered in many industrial settings. It is traditionally modeled as a bilinear, nonconvex optimization problem, and solved by branch-and-bound ...
  • Schilling, Thorsten Ernst (Master thesis, The University of Bergen, 2008)
    The work on this thesis gives a summary of the Gluing/Agreeing techniques, as well as a reference implementation of this methods. Furthermore widely used SAT-solving techniques are explained and a short insight to the ...
  • Sørnes, Alexander N (Master thesis, The University of Bergen, 2013-12-09)
    This thesis will compare two ways of distributing data for parallel graph algorithms: vertex and edge partitioning, using a distributed memory system. Previous studies on the parallelization of graphs has often been ...
  • Hughes, Timothy (Doctoral thesis, The University of Bergen, 2007-01-16)
    Biology is primarily concerned with the study of all phenotypic aspects of living organisms and evolutionary biology is more specifically interested in elucidating how different phenotypes evolved. Proteins (and RNA ...
  • Dregi, Markus Sortland (Master thesis, The University of Bergen, 2012-06-14)
    Motivated by a search game, Fomin, Heggernes and Telle [Algorithmica, 2005] defined the graph parameter treespan, a generalization of the well studied parameter bandwidth. Treespan is the maximum number of appearances ...
  • Heggernes, Pinar; Telle, Jan Arne; Villanger, Yngve (Journal article, SIAM Journals, 2005)
  • Sokolowski, Bernd; Orchard, Sandra; Harvey, Margaret; Sridhar, Settu; Sakai, Yoshihisa (Peer reviewed; Journal article, Public Library of Science, 2011-12-09)
    The large-conductance Ca2+-activated K+ (BK) channel and its b-subunit underlie tuning in non-mammalian sensory or hair cells, whereas in mammals its function is less clear. To gain insights into species differences and ...
  • Parulek, Julius; Jönsson, Daniel; Ropinski, Timo; Bruckner, Stefan; Ynnerman, Anders; Viola, Ivan (Journal article, Wiley, 2014-05-06)
    Molecular visualization is often challenged with rendering of large molecular structures in real time. We introduce a novel approach that enables us to show even large protein complexes. Our method is based on the ...
  • Bezem, Marcus A.; Truong, Anh Hoang (Conference object, University of Bergen, Department of Informatics, 2004-07-13)
    Component software is software that has been assembled from various pieces of standardized, reusable computer programs, so-called components. Executing component software creates instances of these components. For several ...

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