Blar i Department of Informatics på emneord "VDP::Teknologi: 500::Informasjons- og kommunikasjonsteknologi: 550"
Viser treff 1-7 av 7
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Blind search for post-translational modifications and amino acid substitutions using peptide mass fingerprints from two proteases
(Peer reviewed; Journal article, 2008-12-19)Background: Mass spectrometric analysis of peptides is an essential part of protein identification and characterization, the latter meaning the identification of modifications and amino acid substitutions. There are two ... -
Development of Tools for Analyzing and Sharing Proteomics Data
(Doctoral thesis, 2010-03-22) -
FreeContact: Fast and free software for protein contact prediction from residue co-evolution
(Peer reviewed; Journal article, 2014-03-26)Background: 20 years of improved technology and growing sequences now renders residue-residue contact constraints in large protein families through correlated mutations accurate enough to drive de novo predictions of protein ... -
MassSorter: a tool for administrating and analyzing data from mass spectrometry experiments on proteins with known amino acid sequences
(Peer reviewed; Journal article, 2006-01-26)Background: Proteomics is the study of the proteome, and is critical to the understanding of cellular processes. Two central and related tasks of proteomics are protein identification and protein characterization. Many ... -
OLS Dialog: An open-source front end to the Ontology Lookup Service
(Peer reviewed; Journal article, 2010-01-17)Background: With the growing amount of biomedical data available in public databases it has become increasingly important to annotate data in a consistent way in order to allow easy access to this rich source of information. ... -
Output-Sensitive Filtering of Streaming Volume Data
(Peer reviewed; Journal article, 2016-02)Real-time volume data acquisition poses substantial challenges for the traditional visualization pipeline where data enhancement is typically seen as a pre-processing step. In the case of 4D ultrasound data, for instance, ... -
Protease-dependent fractional mass and peptide properties
(Peer reviewed; Journal article, 2008-09-22)Mass spectrometric analyses of peptides mainly rely on cleavage of proteins with proteases that have a defined specificity. The specificities of the proteases imply that there is not a random distribution of amino acids ...