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SearchGUI: a highly adaptable common interface for proteomics search and de novo engines

Barsnes, Harald; Vaudel, Marc
Peer reviewed, Journal article
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URI
https://hdl.handle.net/1956/22093
Date
2018
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  • Department of Biomedicine [695]
Original version
https://doi.org/10.1021/acs.jproteome.8b00175
Abstract
Mass-spectrometry-based proteomics has become the standard approach for identifying and quantifying proteins. A vital step consists of analyzing experimentally generated mass spectra to identify the underlying peptide sequences for later mapping to the originating proteins. We here present the latest developments in SearchGUI, a common open-source interface for the most frequently used freely available proteomics search and de novo engines that has evolved into a central component in numerous bioinformatics workflows.
Publisher
ACS
Journal
Journal of Proteome Research
Copyright
Copyright 2018 American Chemical Society

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