Blar i Department of Informatics på tittel
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Machine Learning Approaches for Biomarker Discovery Using Gene Expression Data
(Chapter, 2021)Biomarkers are of great importance in many fields, such as cancer research, toxicology, diagnosis and treatment of diseases, and to better understand biological response mechanisms to internal or external intervention. ... -
Machine learning approaches for high-dimensional genome-wide association studies
(Doctoral thesis, 2022-08-24)Formålet med Genome-wide association studies (GWAS) er å finne statistiske sammenhenger mellom genetiske varianter og egenskaper av interesser. De genetiske variantene som forklarer mye av variasjonene i genomfattende ... -
Machine Learning methods for mood disorder decision support
(Master thesis, 2017-07-11) -
Macrophage phenotype transitions in a stochastic gene-regulatory network model
(Journal article; Peer reviewed, 2023)Polarization is the process by which a macrophage cell commits to a phenotype based on external signal stimulation. To know how this process is affected by random fluctuations and events within a cell is of utmost importance ... -
Macroscale mesenchymal condensation to study cytokine-driven cellular and matrix-related changes during cartilage degradation
(Journal article; Peer reviewed, 2020)Understanding the pathophysiological processes of cartilage degradation requires adequate model systems to develop therapeutic strategies towards osteoarthritis (OA). Although different in vitro or in vivo models have been ... -
Making the BKW Algorithm Practical for LWE
(Journal article; Peer reviewed, 2020)The Learning with Errors (LWE) problem is one of the main mathematical foundations of post-quantum cryptography. One of the main groups of algorithms for solving LWE is the Blum-Kalai-Wasserman (BKW) algorithm. This paper ... -
The male germ cell gene regulator CTCFL is functionally different from CTCF and binds CTCF-like consensus sites in a nucleosome composition-dependent manner
(Peer reviewed; Journal article, 2012-06-18)Background: CTCF is a highly conserved and essential zinc finger protein expressed in virtually all cell types. In conjunction with cohesin, it organizes chromatin into loops, thereby regulating gene expression and epigenetic ... -
Managing spatial selections with contextual snapshots
(Peer reviewed; Journal article, 2014-12)Spatial selections are a ubiquitous concept in visualization. By localizing particular features, they can be analysed and compared in different views. However, the semantics of such selections often depend on specific ... -
Mandatory or Voluntary Course Work in Introductory Programming Courses?
(Journal article; Peer reviewed, 2023)Which approach, mandatory or voluntary weekly labs, is more conducive to student learning? We conducted a quasi-experiment in a bachelor level programming course (CS2) at the Department of Informatics at the University of ... -
Mapping Graphs to Trees : Partition Trees, Leaf Powers and Decompositions
(Doctoral thesis, 2025-02-27)Mange anvendelsar i informatikken kan kokast ned til å finne struktur i datamengder. Datamengder kan gjerne framstillast som grafar, og mange slags strukturar kan framstillast som tre. Difor er det ofte ønskjeleg å overføre ... -
Market equilibria and money
(Journal article; Peer reviewed, 2021)By the first welfare theorem, competitive market equilibria belong to the core and hence are Pareto optimal. Letting money be a commodity, this paper turns these two inclusions around. More precisely, by generalizing the ... -
MassAnalyzer, a program to help find labeled peptides and compare them to their unlabeled counterparts in a SILAC experiment
(Master thesis, 2008-11-27)Mass spectrometry(MS) have become an increasingly popular analysis method for high throughput experiments on proteins in biology. SILAC(stable isotope labeling by amino acids in cell culture) is a method within MS that ... -
MassSorter: a tool for administrating and analyzing data from mass spectrometry experiments on proteins with known amino acid sequences
(Peer reviewed; Journal article, 2006-01-26)Background: Proteomics is the study of the proteome, and is critical to the understanding of cellular processes. Two central and related tasks of proteomics are protein identification and protein characterization. Many ... -
Material Set Theory in Homotopy Type Theory
(Doctoral thesis, 2024-11-29)Denne avhandlingen undersøker modeller av materiell mengdelære i homotopi typeteori (HoTT), det vil si, tolkninger av språket for mengdelære inn i HoTT slik at tolkningene av aksiomene i mengdelære kan vises å holde. En ... -
Mathematical Modeling and Simulation Provides Evidence for New Strategies of Ovarian Stimulation
(Journal article; Peer reviewed, 2021)New approaches to ovarian stimulation protocols, such as luteal start, random start or double stimulation, allow for flexibility in ovarian stimulation at different phases of the menstrual cycle. It has been proposed that ... -
Mathematical modelling of follicular growth and ovarian stimulation
(Journal article; Peer reviewed, 2022)The aim of ovarian stimulation in fertility treatment is to increase the number of large follicles and hence the number of eggs that can be retrieved for in vitro fertilisation (IVF). However, large inter- and intra-individual ... -
Mathematical modelling of nitric oxide/cyclic GMP/cyclic AMP signalling in platelets
(Peer reviewed; Journal article, 2018-02-19)Platelet activation contributes to normal haemostasis but also to pathologic conditions like stroke and cardiac infarction. Signalling by cGMP and cAMP inhibit platelet activation and are therefore attractive targets for ... -
A matrix-free method for regularisation with unrestricted variables
(Master thesis, 2008)In this thesis a method for the partially norm constrained least squares problem is presented. The method relies on a large-scale trust-region solver and has a low storage requirement. A combination of image misalignment ... -
A matter of timing : A modelling-based investigation of the dynamic behaviour of reproductive hormones in girls and women
(Doctoral thesis, 2023-05-05)Hypothalamus-hypofyse-gonade aksen er en del av det kvinnelige endokrine systemet, og regulerer evnen til reproduksjon. Hormoner produsert og utskilt fra tre kjertler (hypotalamus, hypofysen, eggstokkene) påvirker hverandre ... -
Maximum matching width: New characterizations and a fast algorithm for dominating set
(Peer reviewed; Journal article, 2015)We give alternative definitions for maximum matching width, e.g., a graph G has mmw(G) <= k if and only if it is a subgraph of a chordal graph H and for every maximal clique X of H there exists A,B,C \subseteq X with A ...